Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq16 116 4e-21
seq18 102 8e-17
seq15 95.1 1e-14
>seq16
Length=726111
Score = 116 bits (128), Expect = 4e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
||||| | |||||||| | || ||||||||||||||||||||||| | | || |
Sbjct 202557 AATCTTAAGACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGATAATGTTCTA 202498
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
| ||||| | || || ||||| |||| | | || || || |||||||| |||||
Sbjct 202497 CCATCTTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAGGAATACCTTCC 202438
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| ||||| ||||| || ||| | || | | |||| | || ||||||| |||
Sbjct 202437 TTATCTTGGATTTTAGATTTGACAGCGTCGATAGAGTCACTAGATTCAACTTCTAAAGTG 202378
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
| |||||| || || |||||||| || || |||||||||
Sbjct 202377 ATGGTCTTACCAGTTAAAGTTTTAACAAAGATTTGCATT 202339
>seq18
Length=436904
Score = 102 bits (112), Expect = 8e-17
Identities = 155/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
||||| | |||| || | || |||||||||||||||||||| || | | || |
Sbjct 25605 AATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTA 25546
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
| ||||| | ||||| || || | || | | || || || || ||||| ||||||
Sbjct 25545 CCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCT 25486
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| ||||| ||||| ||| ||| || | | |||| | || || || | |||
Sbjct 25485 TTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACCTCCAAAGTA 25426
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
| |||||| || || | ||||||||||||||||||||||||
Sbjct 25425 ATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 25385
>seq15
Length=137011
Score = 95.1 bits (104), Expect = 1e-14
Identities = 153/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| || |||| || | || ||||||||||| ||||||||||| |
Sbjct 38887 ACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGA 38946
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| | ||||||| | || || || ||| | || | | || || || || ||
Sbjct 38947 TAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 39006
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| ||||| || ||||| || || ||| ||| | || | || ||| | | || ||
Sbjct 39007 AATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGAC 39066
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435
||| | ||| | |||||| ||||| || || || || |||
Sbjct 39067 TTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAAA 39106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644687579920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |