Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq16 141 7e-29
seq18 140 2e-28
seq15 129 4e-25
>seq16
Length=726111
Score = 141 bits (156), Expect = 7e-29
Identities = 170/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||||| |||| ||| || || || |||||||| ||||||||||| |
Sbjct 202566 CCACCTCTTAATCTTAAGACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCA--G 202509
Query 15010 AGAAT--TCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| ||| ||| | |||||||||||||| || ||| | ||||| | ||||| || |
Sbjct 202508 ATAATGTTCTACCATCTTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAG 202449
Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127
|||| |||||||| || ||||| ||| ||| || |||| || ||| ||| |
Sbjct 202448 GAATACCTTCCTTATCTTGGATTTTAGATTTGACAGCGTCGATAGAGTCACTAGATTCAA 202389
Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
| ||||| || ||||| ||||| || | |||||| ||||| ||||||||
Sbjct 202388 CTTCTAAAGTGATGGTCTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 202340
>seq18
Length=436904
Score = 140 bits (154), Expect = 2e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| |||||||| ||||| || | || || |||||||| |||||||| ||
Sbjct 25614 CCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAT 25555
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
| | |||| | ||||||||||| || |||||| | || || | ||||| || ||||
Sbjct 25554 AAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGA 25495
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||| ||||| ||||| || ||| | || |||| ||| | ||| ||
Sbjct 25494 ATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACC 25435
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
|| || |||||||| ||||| || ||||||||||| ||||||||||| ||
Sbjct 25434 TCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 25385
>seq15
Length=137011
Score = 129 bits (142), Expect = 4e-25
Identities = 170/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008
||||||| |||||||| |||||| || || ||||| |||||||| ||||||||||| | |
Sbjct 38888 CCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGAT 38947
Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068
|| |||| |||||||||||||||| ||||| | || || | ||||| || |||
Sbjct 38948 AAG-GTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 39006
Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128
||| ||||||||||| || ||| || ||| || ||||| || | ||| ||
Sbjct 39007 AATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGAC 39066
Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTG 15181
|| || || ||||| ||||| || | || || |||||| | | ||| |||
Sbjct 39067 TTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAAACTGTTTATAATTG 39119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357391921597130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |