Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq14 217 2e-51 >seq14 Length=1507144 Score = 217 bits (240), Expect = 2e-51 Identities = 821/1280 (64%), Gaps = 23/1280 (2%) Strand=Plus/Plus Query 116085 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 116144 |||||| || ||||| || || || | | |||| | || |||| || || ||||| Sbjct 780756 ACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCATAGGTTCCTTCAATTTCAGCTAATTC 780815 Query 116145 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTT 116204 | | || || | || |||||||| || || || ||||| || |||| | | || Sbjct 780816 AGTGGAAGCTTCCAAAGCAGCGTGATAAATGGTTTCGAAAATTTGAATGTTCAATTCYTT 780875 Query 116205 GGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGAC 116264 ||| | || ||||| || | | | ||| ||||| ||| || | |||||| || Sbjct 780876 GGCTTTTTCAGAATCGAATGGAACTCTTAACATCATAAAAGTATCAGCCAAACCTTGAAC 780935 Query 116265 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAA 116324 ||| | | |||| || | |||||||| ||||| ||| ||| || || || || ||| | Sbjct 780936 ACCTACGGCAATAGGTCTGTGTCTCATGTTAGATCTTCTAGCAGTTTCAACAGGGTAATA 780995 Query 116325 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 116384 || || || ||||| |||| || || | | |||||| | ||| ||||| || Sbjct 780996 GTTTCTGTCAATAACAGCGTTTAAGTTCTTAGCAATAACCTTACAAACTTCGTGAAGTTT 781055 Query 116385 TTCGTAATCAAAACTGCGAGTCTCTTCAT----TGACATACTTAGGAAGG--------GC 116432 || | | || || | |||||| || || || | ||| |||| || Sbjct 781056 TTTGAAGTCGTAAGTTTGAGTCTTTTGATCTTCKGAGACCTTTACAAAGGCTGGTAAGGC 781115 Query 116433 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 116492 | || || | ||||| |||| || || | | ||| | ||| || | |||||| Sbjct 781116 AACAGARGCTAAGTTACAAACAGCAGTTTCCTTATCATCTGAGTATTCAACAATTTCACA 781175 Query 116493 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 116552 ||| || || ||| ||||| || ||||||||||||||||| || ||| | ||||| || Sbjct 781176 ACATAAGTTAGAAGATTTAATTGTACCCAAGTTCTTTTGATTAGATTTTTTATTACAAGC 781235 Query 116553 ATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612 ||||||||| | || | || || || || || ||||||| | | || || | ||| Sbjct 781236 ATCCTTGTAAACAATGAAAGGAGTACCAGTTTCGGTTTGGGCTTCTAAGATGGCGTACCA 781295 Query 116613 T-ACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT-GTAG 116670 | || | | | || | | || | ||| || || ||||| || || || Sbjct 781296 TAACTTTTGAGCCTTG-ATGGTCTTTCTACCTCTACCTTCTAGTTCGTA-TTGGTCATAW 781353 Query 116671 AGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730 || ||||| || ||||| ||| || | || || || | | ||| |||| Sbjct 781354 AGCTTTTCAAAGTCATCACCATAAGCATCRCTCAAACCAGGAGCTTCACTAGGAGAGAAT 781413 Query 116731 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 116790 | || ||| | |||| ||| || | ||||||||| | ||| || ||||| | || Sbjct 781414 AAAGTCCAATCACCATTTGCCTTGACTCTCTTCATGAACAAGTCAGGAATCCATAAAGCT 781473 Query 116791 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850 | ||| | ||| | | | |||||| | || ||||| | | || | || Sbjct 781474 GGGAATAAATCTCTAGCTCTGATTTCTTCCTTACCGTGATTTTTTCTGATGTCGATGAAA 781533 Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTGCGACG 116906 || | |||||| | |||||| ||||| ||||||| || | | ||| ||| | Sbjct 781534 TCAAAGATATCAGAGTGCCATGGTTCTAGGTACAGAGCAAAGGCACCAGGTCTTTTG-TT 781592 Query 116907 ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACC 116966 |||| | || | ||||| || || || ||| || || | || ||| ||||| | ||| Sbjct 781593 ACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCTAACCATAGGAATCAAACC 781652 Query 116967 ATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTG 117026 || || ||||| || || ||| ||| ||| ||||| | ||| ||||| Sbjct 781653 ATTGGAAGTACCATTGGTACCAGCAATGTAAGAGCCAGTGGATCTGATGTTGTGAATGTG 781712 Query 117027 CATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGAT 117086 | ||||||||| || || ||| || ||||| || || ||| | | | | ||||| Sbjct 781713 TAAACCAATACCACCKGCAGTCTTAGAAATTTGAGCACATTCCTTYAAGGTATCATAGAT 781772 Query 117087 CCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGG 117146 || || || || ||| |||| | | || | ||| || |||||||| || ||||| Sbjct 781773 ACCGTCAATAGAATCATCCTTCATAGAAATTAAGAAACAAGAAGACATTTGAGGTCTTGG 781832 Query 117147 TGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATC 117206 |||||||| ||||| || ||||| | || ||| | || | ||| |||||| | Sbjct 781833 AGTACCAGCATTGAATAGTGTTGGAGAAGCATGGGTAAAGTATCTTTGAGACATCAAGTT 781892 Query 117207 GTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAA 117266 ||| || || | ||| ||||| ||| ||||| ||||| | | || | ||| | Sbjct 781893 GTAAGTTTCGATGACTTTTTCAATGTTTTCACCGTGGATACCAACAGCAACTCTCATRAT 781952 Query 117267 CATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTA-ACTCTTCTCCA 117325 || | ||| ||| |||| | | |||||| || | || | ||| |||| |||| Sbjct 781953 CAAATGTTGTGGTCTTTCAACGATCTTACCATTGATCTTCAATAAGTATGATCTT-TCCA 782011 Query 117326 AGGTCTTGAGACCAAAATAG 117345 | ||||||| |||||||||| Sbjct 782012 ATGTCTTGAAACCAAAATAG 782031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507061960880