Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq14 239 6e-58 seq1 98.7 1e-15 >seq14 Length=1507144 Score = 239 bits (264), Expect = 6e-58 Identities = 1120/1759 (64%), Gaps = 59/1759 (3%) Strand=Plus/Minus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| ||||| | || | ||| | || || | |||||||| || ||| | ||||| Sbjct 781970 GAAAGACCACAACATTTGATYATGAGAGTTGCTGTTGGTATCCACGGTGAAAACATTGAA 781911 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACC 111725 || | || || ||| || |||||| | | || | ||| || | ||||| Sbjct 781910 AAAGTCATCGAAACTTACAACTTGATGTCTCAAAGATACTTTACCCATGCTTCTCCAACA 781851 Query 111726 CTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAG 111785 || ||||| |||||||| |||||||| |||||||| ||||||| | ||| | | ||| Sbjct 781850 CTATTCAATGCTGGTACTCCAAGACCTCAAATGTCTTCTTGTTTCTTAATTTCTATGAAG 781791 Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGG 111845 || ||||| || | || || || | || | | |||||||| ||||| || ||| Sbjct 781790 GATGATTCTATTGACGGTATCTATGATACCTTRAAGGAATGTGCTCAAATTTCTAAGACT 781731 Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGT 111905 || |||||||| || | ||||| || | ||||| ||| ||| ||| ||| Sbjct 781730 GCMGGTGGTATTGGTTTACACATTCACAACATCAGATCCACTGGCTCTTACATTGCTGGT 781671 Query 111906 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 111965 || |||||| || ||||| | ||||| ||| || | || || ||| ||| || | Sbjct 781670 ACCAATGGTACTTCCAATGGTTTGATTCCTATGGTTAGAGTTTTCAACAACACTGCCAGA 781611 Query 111966 TATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCA 112019 ||||| | |||| ||| | ||| || || | || | || || || ||| Sbjct 781610 TATGTTGATCAAGGTGG---TAACAAAAGACCTGGTGCCTTTGCTCTGTACCTAGAACCA 781554 Query 112020 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCG 112079 |||||| | |||||| | || ||| | || | | || || ||| | || || Sbjct 781553 TGGCACTCTGATATCTTTGATTTCATCGACATCAGAAAAAATCACGGTAAGGAAGAAAT- 781495 Query 112080 CGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 112138 | | || | ||| | ||| | ||| | |||||||| || | |||||||||||||| | Sbjct 781494 CAGAGCTAGAGATTTATTCCCAGCTTTATGGATTCCTGACTTGTTCATGAAGAGAGTCAA 781435 Query 112139 GGAGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCCGGTCTCTCCGATGCCG 112197 || | ||| ||||| || | || | ||| || ||| | || ||| | ||||| Sbjct 781434 GGCAAATGGTGATTGGACTTTATTCTCTCCTAGTGAAG-CTCCTGGTTTGAGYGATGCTT 781376 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTAC-ACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG 112256 ||||| || |||||| || || || || ||||| |||| || | | | | Sbjct 781375 ATGGTGATGACTTTGAAAAGCTWTATGACCAA-TACGAACTAGAAGGTAGAGGTAGAAAG 781317 Query 112257 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316 || | ||| | | ||| | || || | | | |||||||| |||||||| Sbjct 781316 ACCATCAAGGCTCAAAAGTTATGGTACGCCATCTTAGAAGCCCAAACCGAAACTGGTACT 781257 Query 112317 CCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 112376 || | || ||||||| || || ||||| |||| |||||||||||| |||||| Sbjct 781256 CCTTTCATTGTTTACAAGGATGCTTGTAATAAAAAATCTAATCAAAAGAACTTGGGTACA 781197 Query 112377 ATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 112436 || || ||| ||| | ||| ||||| | |||| |||| | | || || ||| Sbjct 781196 ATTAAATCTTCTAACTTATGTTGTGAAATTGTTGAATACTCAGATGATAAGGAAACTGCT 781137 Query 112437 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTG------------GATCCAGAG 112484 || |||||| | || || | || | || | ||| |||| | || Sbjct 781136 GTTTGTAACTTAGCYTCTGTTGCCTTACCAGCCTTTGTAAAGGTCTCMGAAGATCAAAAG 781077 Query 112485 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTA 112544 || | || | || | ||||||| ||||||||| || | | | || ||| || Sbjct 781076 ACTCAAACTTACGACTTCAAAAAACTTCACGAAGTTTGTAAGGTTATTGCTAAGAACTTA 781017 Query 112545 AACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGA 112604 ||| |||||||| ||||| | |||||| ||||| |||||| | | |||||| |||||| Sbjct 781016 AACGCTGTTATTGACAGAAACTATTACCCTGTTGAAACTGCTAGAAGATCTAACATGAGA 780957 Query 112605 CACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCAC 112664 ||| | || |||| | ||||| |||||| | || ||| || || | | | Sbjct 780956 CACAGACCTATTGCCGTAGGTGTTCAAGGTTTGGCTGATACTTTTATGATGTTAAGAGTT 780897 Query 112665 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCAC 112724 |||| ||||| || |||| || ||| | || | || || || || || |||||| Sbjct 780896 CCATTCGATTCTGAAAAAGCCAARGAATTGAACATTCAAATTTTCGAAACCATTTATCAC 780837 Query 112725 GCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 112784 || ||| | || || | || || || || |||| || | |||| | | || Sbjct 780836 GCTGCTTTGGAAGCTTCCACTGAATTAGCTGAAATTGAAGGAACCTATGCTTCTTACGAA 780777 Query 112785 GGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTT 112844 |||||||||||||| ||||| || | |||| ||| | | |||| || |||| || Sbjct 780776 GGTTCTCCAGCTTCTCAAGGTGTTTTACAATACGATTTCT-GGAACGTTGCTCCAA-CTA 780719 Query 112845 CACTACGACTGGGA-CGCTCTCAA-GGAACGC----ATCAAGGAGAAGGGTCTTCGTAAC 112898 | || ||||| | || || ||| || || || | ||| | | ||| Sbjct 780718 CCYTA----TGGGATTGGACTGAATTGAAGGCTAAGATTGCCAAGCACGGTTTAAGAAAC 780663 Query 112899 AGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 112958 | ||| | || || |||||||| || || || | ||||| || ||| | |||||| Sbjct 780662 TCCTTATTGGTTGCTCCTATGCCAACTGCTTCTACTTCCCAAATTTTAGGTTACAATGAA 780603 Query 112959 TGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGT 113017 || || ||||| | ||| | ||||| || ||| |||||||| | | || || | Sbjct 780602 TGTTTCGAACCATTCACTTCTAACATGTACTCT-AGAAGAACTTTATCTGGTGAATACCA 780544 Query 113018 GATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATAT 113077 ||||||||| | | || | || | || || ||| | ||| | | || Sbjct 780543 AATTGTCAACCCATACTTATTGAAGGATTTAGTTGATATGGGTATTTGGGATGAAGCCAT 780484 Query 113078 GAAG---GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTG-TGGATATTCCAG 113133 |||| || |||| | || |||||| || ||| | |||| | ||||| Sbjct 780483 GAAGTCTAATATCATTGCTAA---CAATGGTTCTATCCAACA-ATTGCCAAACATTCCTC 780428 Query 113134 ATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAA--ATCAAGATGAAGGATGTCATTGA 113191 | ||||| ||| | ||||| || ||||||||| |||| | ||| | ||||||| Sbjct 780427 AAGAAATGAAGGATTTGTATAAAACTGTTTGGGAATTATCACAA--AAGACTATCATTGA 780370 Query 113192 CATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAA---TCTATTCAT 113248 |||||||| ||| | |||||||||||| ||| ||||| || |||| Sbjct 780369 TATGGCCGCTGATAGACAAGCTTTCATTGATCAATCTCATTCCATGAACATTCACATCAT 780310 Query 113249 GGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCT 113308 || ||||| ||| ||| | |||| |||||| | ||| |||||| |||||| | Sbjct 780309 GG---CCCCAACTATGGGTAAGTTAACTTCCATGCACTTCTACGGTTGGAGCAAGGGTTT 780253 Query 113309 CAAAACGGGGATGTATTAC 113327 || || || ||||| ||| Sbjct 780252 GAAGACTGGTATGTACTAC 780234 >seq1 Length=1289090 Score = 98.7 bits (108), Expect = 1e-15 Identities = 227/334 (68%), Gaps = 6/334 (2%) Strand=Plus/Plus Query 176734 ACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATACCG 176793 ||||||||| |||||||| || | ||| ||| ||||||||||| | | ||||||| | Sbjct 69992 ACCCTTGATATGGGAACCATCATAATCTTGATCAGTCATGATCATTAAATGACCATATCT 70051 Query 176794 AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATC 176853 | | ||||||| ||| ||| ||||| | ||||| || ||||||| | | Sbjct 70052 TAAAGAAGTAACATCTGTATAAGTCTTTTTATGTTGTAAACCCATAATTTTCTTGATAGC 70111 Query 176854 GTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTACAC- 176911 ||||| ||||| ||| ||| ||| |||| ||||| | ||||| | | || Sbjct 70112 -TTGAATTTCTTGATTTTTATTGACCTGATCAGCAGAAGCATCTCTGACATT-TAAGACT 70169 Query 176912 TTCCCACGAAGAGGGAAGACA-CCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAAC 176970 || || | | ||| | ||| ||||| | ||| | |||||| | ||| | ||| ||||| Sbjct 70170 TTACCTCTTAATGGGTA-ACATCCGTAATAATCTCTACCAACAATAGACAAACCAGCAAC 70228 Query 176971 CGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGTGC 177030 || | | || ||||||||||| ||||| | | | ||||| || | | | Sbjct 70229 AGCCAATGACTTGGCAGAATCACCTTCTGTTAATAGTAAAGTACATTTATGACCCTCTCT 70288 Query 177031 CGTACCCGCCTTGTTCGCATCATCCAATTTGGGA 177064 ||||| |||||||| ||||| || ||||| ||| Sbjct 70289 AGTACCGGCCTTGTTAGCATCTTCTAATTTAGGA 70322 Score = 95.1 bits (104), Expect = 2e-14 Identities = 212/312 (68%), Gaps = 11/312 (4%) Strand=Plus/Minus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 |||||||| | || ||||| ||||| | ||| ||| | ||||||||| | Sbjct 433459 AAACCATCTAGTTCGACCAAAATTTGGTTTAAAGTGGCTTCTCTTTCATCATTACC---- 433404 Query 16035 ATACCACCAGCACTGCGTTGCTTTCCCAC-GGCATCAATCTCATCAATGAAGACGATGCA 16093 ||||| ||||| | | ||||| ||| |||||| || ||||||||||| | ||| | Sbjct 433403 --ACCACTAGCACCTC-TGGCTTTACCAATGGCATCGATTTCATCAATGAAAATGATACT 433347 Query 16094 TGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 16153 ||| ||||| | || |||||| ||||| | ||| | || |||| ||| || Sbjct 433346 TGGGGCATTTTTTCTGGCTGTTTCAAATAGATCTCTTACTCTGGAAGCACCCATACCTAC 433287 Query 16154 AAACATCTCCACAAAGTTTGCGGCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCG 16212 ||||||||| ||||| | || | ||| | | || ||| || ||| | ||||| | Sbjct 433286 AAACATCTCAACAAATTCAGCACCAGAA-ACAGAATAGAATGGCACACCTGCCTCACCGG 433228 Query 16213 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTC 16272 || | || ||| | |||||||||||| |||||||| ||| | | | ||||||| Sbjct 433227 CAGTTGCCTTGGCCAAAAGAGTCTTACCTGTACCTGGAGGACCAGACAAAATAGCACCTC 433168 Query 16273 GTGG-AATCTTG 16283 || ||||||| Sbjct 433167 TAGGTAATCTTG 433156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742260332960