Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq14 309 4e-79 seq1 107 2e-18 >seq14 Length=1507144 Score = 309 bits (342), Expect = 4e-79 Identities = 934/1426 (65%), Gaps = 49/1426 (3%) Strand=Plus/Plus Query 105923 GTTCTTCTCAGA-TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGAT 105981 |||||||| ||| || ||||| | ||| | ||||| || |||||||| | ||| || || Sbjct 780562 GTTCTTCT-AGAGTACATGTTAGAAGTGAATGGTTCGAAACATTCATTGTAACCTAAAAT 780620 Query 105982 TTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACC---CTT 106038 ||| | || || || |||||||| || || | ||| | ||| | | ||| ||| Sbjct 780621 TTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAAACCGTGCTT 780680 Query 106039 TTCCTTGAT-GCGTTCC-TTGAGAACA-TCCCAGTCG-TAGTTG-AGCTTGGTTTCACCT 106093 | | | || ||| || || || ||||| | |||||| ||| ||| Sbjct 780681 GGCAATCTTAGCCTTCAATTCAGTCCAATCCCATARGGTAGTTGGAGCAACGTT------ 780734 Query 106094 TCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAG 106153 ||| | ||| |||| | || ||||| || | |||||||| || | | ||||| Sbjct 780735 --CCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCATAG 780792 Query 106154 GAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCA 106213 | |||| |||||| |||||| | || |||| | |||||||| |||||||| Sbjct 780793 GTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGGTTTCG 780852 Query 106214 AAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATA 106273 || || || |||| || ||||||| || ||||| |||| | ||| ||| Sbjct 780853 AAAATTTGAATGTTCAATTCYTTGGCTTTTTCAGAATCGAATGGAACTCTTAACATCATA 780912 Query 106274 AATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTT 106333 || ||| || | |||||||||||| | ||||||||||||||| ||| ||||| || Sbjct 780913 AAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTTAGATCTT 780972 Query 106334 CGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACA 106393 | ||||| ||||| || ||| | ||||||||||| || ||||| || || | || | Sbjct 780973 CTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTAAGTTCTTAGCAATA 781032 Query 106394 ATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCAT-------- 106445 | ||| | ||| |||||||||| | || |||| |||||| || || Sbjct 781033 ACCTTACAAACTTCGTGAAGTTTTTTGAAGTCGTAAGTTTGAGTCTTTTGATCTTCKGAG 781092 Query 106446 ----TGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTA 106501 | ||| | ||| | ||| | || || || || |||||||| || || | | | Sbjct 781093 ACCTTTACAAAGGCTGGTAAGGCAACAGARGCTAAGTTACAAACAGCAGTTTCCTTATCA 781152 Query 106502 TCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTT 106561 |||| ||| || | |||||| ||| ||||| ||| ||||| || ||||| |||||| Sbjct 781153 TCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCCAAGTTCTTT 781212 Query 106562 TGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTC 106621 || ||| ||||| || || ||||||||||| | ||| | || || || || || || Sbjct 781213 TGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACCAGTTTCGGTT 781272 Query 106622 TGTGACTTGAGAATTGCCTTCCA-CACATCGGCGGCTGGTACAATGGCGT---TGGCCCG 106677 || | | | || || | ||| || | | | || | |||| | | | | Sbjct 781273 TGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTG----ATGGTCTTTCTACCTCT 781328 Query 106678 TCCCTCCGCCTCGTACTTTGT-GTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGA 106736 || || ||||| || || || || |||||| || ||||| || || | Sbjct 781329 ACCTTCTAGTTCGTA-TTGGTCATAWAGCTTTTCAAAGTCATCACCATAAGCATCRCTCA 781387 Query 106737 GACCTGGTGCCTTGTCT-GGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTC 106795 ||| || | ||| || ||| |||| | || ||| | |||| ||| || | |||| Sbjct 781388 AACCAGGAG-CTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCTCTTC 781446 Query 106796 ATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTC 106854 ||||| | ||| |||||||| | | || || | ||||||| | | || ||||| | Sbjct 781447 ATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGA-TTTCTTCCTT 781505 Query 106855 ACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATA 106914 ||| || || || | || | ||| || | |||||| | ||||||||| || || || Sbjct 781506 ACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAGGTA 781565 Query 106915 GACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGT 106970 | || | | || |||| | ||| |||||| ||||| | || ||| || Sbjct 781566 CAGAGCAAAGGCACCAGGTCTTTTG-TTACCACCTTGATCAACATATCTGGCAGTGTTGT 781624 Query 106971 TAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAG 107030 | || || | || ||| ||||| | ||||| || |||||| || || ||| || Sbjct 781625 TGAAAACTCTAACCATAGGAATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTAAG 781684 Query 107031 ATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTT 107090 | | ||| ||| | | || ||||| | |||||||| || || ||| || |||| Sbjct 781685 AGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCKGCAGTCTTAGAAATTT 781744 Query 107091 GCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAA 107150 | ||||| ||| | | || |||||||||||| || || || ||||| | | || | Sbjct 781745 GAGCACATTCCTTYAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAAATTA 781804 Query 107151 GGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGT 107210 ||| ||| ||||| || |||||||| |||||||||||||| || ||||| | || | Sbjct 781805 AGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGCAT 781864 Query 107211 GAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCC 107270 | | || | ||| |||||| || ||| || || | ||| ||||||| ||| | Sbjct 781865 GGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTTCAC 781924 Query 107271 CGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGGTGTTTC 107316 ||||||| || | || || | ||| | || | ||| ||| |||| Sbjct 781925 CGTGGATACCAACAGCAACTCTCATRATCAAATGTTGTGGTCTTTC 781970 >seq1 Length=1289090 Score = 107 bits (118), Expect = 2e-18 Identities = 193/277 (70%), Gaps = 10/277 (4%) Strand=Plus/Minus Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9341 |||||||| | || ||||| |||||| | ||| ||| | ||||||||| | Sbjct 433459 AAACCATCTAGTTCGACCAAAATTTGGTTTAAAGTGGCTTCTCTTTCATCATTACC---- 433404 Query 9342 ATACCACCAGCACTGCGTTGCTTTCCCAC-GGCATCAATCTCATCAATGAAGACAATACA 9400 ||||| ||||| | | ||||| ||| |||||| || ||||||||||| | |||| Sbjct 433403 --ACCACTAGCACCTC-TGGCTTTACCAATGGCATCGATTTCATCAATGAAAATGATACT 433347 Query 9401 TGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAAC 9460 ||| ||||| | ||| ||||||| ||||| | || || || |||| ||| || Sbjct 433346 TGGGGCATTTTTTCTGGCTGTTTCAAATAGATCTCTTACTCTGGAAGCACCCATACCTAC 433287 Query 9461 AAACATCTCCACAAAGTTTGCGGCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCG 9519 ||||||||| ||||| | || | ||| | | || ||| || ||| | ||||| | Sbjct 433286 AAACATCTCAACAAATTCAGCACCAGAA-ACAGAATAGAATGGCACACCTGCCTCACCGG 433228 Query 9520 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9556 || | || ||| | |||||||||||| |||||||| Sbjct 433227 CAGTTGCCTTGGCCAAAAGAGTCTTACCTGTACCTGG 433191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980667254320