Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_015290.1
Length=182180
Score E
Sequences producing significant alignments: (Bits) Value
seq1 87.8 2e-12
>seq1
Length=1289090
Score = 87.8 bits (96), Expect = 2e-12
Identities = 190/281 (68%), Gaps = 9/281 (3%)
Strand=Plus/Plus
Query 150979 CCAGAAATTCTTGATGGAAGAGTAAAGACTTTACATCCAAAGATTCATGGTGGTATTCTT 151038
|| ||||| | | ||| ||||| || |||||||||||| | |||||||||||| |
Sbjct 958282 CCTGAAATGTTAGGTGGTAGAGTCAAAACTTTACATCCAGCTGTCCATGGTGGTATTTTA 958341
Query 151039 GC-ACAACGAGGTAATTCTAGTCATGATTTAGATCTTAAGGTAA--ATCGTATTGAACCG 151095
|| | || | || || |||| |||| | || | | | | || || |
Sbjct 958342 GCCAGAAACTTGGAA----AGCGATGAAAAAGATTT--AGCTGATCAACACATCGATAAG 958395
Query 151096 ATTGATATTGTTGCTGTAAACCTATATCCATTTAAAGAAACTGTTGCTAAACCAGGTGTA 151155
||||| |||||| | || ||||||||||| || |||||||||||||| |||||
Sbjct 958396 GTTGATTTTGTTGTTTGTAATCTATATCCATTCAAGGAAACTGTTGCTAAGGTCGGTGTT 958455
Query 151156 ACTCTTGCAGAAGCAATTGAGAATATTGACATTGGTGGTCCTAGTATGGTAAGATCAGCA 151215
||| || | ||||| |||| | ||||||||||||||| || | ||||| | ||
Sbjct 958456 ACTGTTCCTGAAGCTGTTGAAGAAATTGACATTGGTGGTGTTACCTTACTAAGAGCTGCT 958515
Query 151216 GCAAAGAATTATAAACATGTTGCTGTGTTAACTAATCCAAA 151256
|| ||||| || ||| || | ||| || |||||||
Sbjct 958516 GCCAAGAACCATGCCAGAGTTACTATTTTATCTGATCCAAA 958556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582847868859200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |