Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq18 161 2e-34 seq16 132 1e-25 seq14 96.9 8e-15 >seq18 Length=436904 Score = 161 bits (178), Expect = 2e-34 Identities = 170/224 (76%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| || || | ||| | |||||| ||||||||||| ||||| || | | ||| Sbjct 25609 TCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGATAAAGT 25550 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||||| |||||||| | || |||||| || || ||||| || Sbjct 25549 TCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGAATACC 25490 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||| ||||| ||| || || || || | || ||| ||| || || | Sbjct 25489 TTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACCTCCAA 25430 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 |||| ||||| || || | |||||||||||| | |||||||| Sbjct 25429 AGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTT 25386 >seq16 Length=726111 Score = 132 bits (146), Expect = 1e-25 Identities = 163/223 (73%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| || || || || |||||||| ||||||||||| |||||||| | | || Sbjct 202561 TCTTAATCTTAAGACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGATAATGT 202502 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | || ||||| ||||| || | || |||||| || |||||||| || Sbjct 202501 TCTACCATCTTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAGGAATACC 202442 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| || ||||| ||||| ||||| || || | ||| | ||| ||||| | Sbjct 202441 TTCCTTATCTTGGATTTTAGATTTGACAGCGTCGATAGAGTCACTAGATTCAACTTCTAA 202382 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || | ||||| || || |||||||| || || | ||||||| Sbjct 202381 AGTGATGGTCTTACCAGTTAAAGTTTTAACAAAGATTTGCATT 202339 >seq14 Length=1507144 Score = 96.9 bits (106), Expect = 8e-15 Identities = 217/323 (67%), Gaps = 6/323 (2%) Strand=Plus/Minus Query 160514 TGGCACGTTGACATCTTTGACTTTGTCGA--TGCGAAAAAGCCCGGAGGTGATGACCTGA 160571 |||||| ||| |||||||| || |||| | |||||| | | || | || | Sbjct 781553 TGGCACTCTGATATCTTTGATTTCATCGACATCAGAAAAAATCACG--GTAAGGAAGAAA 781496 Query 160572 TGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGA 160631 | ||||| ||||| | ||| || | |||| | | || | |||||||||||||| | Sbjct 781495 TCAGAGCTAGAGATTTATTCCCAGCTTTATGGATTCCTGACTTGTTCATGAAGAGAGTCA 781436 Query 160632 AAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGA-TGATGTT 160690 | | ||||| ||||||| | |||| ||| | |||||| ||||| |||| |||| | Sbjct 781435 AGGCAAATGGTGATTGGACTTTATTCTCTCCTAGTGAAGCTCCTGGT-TTGAGYGATGCT 781377 Query 160691 TATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAG 160750 |||||| || || || | || ||||| ||||||| ||| || |||| | |||| Sbjct 781376 TATGGTGATGACTTTGAAAAGCTWTATGACCAATACGAACTAGAAGGTAGAGGTAGAAAG 781317 Query 160751 GTCGTGAAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATG 160810 | | ||||| ||| | | ||| | |||| | | |||||| ||| |||| Sbjct 781316 ACCATCAAGGCTCAAAAGTTATGGTACGCCATCTTAGAAGCCCAAACCGAAACTGGTACT 781257 Query 160811 CCCTTTATCGCATACAAGGATGC 160833 || || || | ||||||||||| Sbjct 781256 CCTTTCATTGTTTACAAGGATGC 781234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481344125806