Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq14 387 2e-102
seq1 360 2e-94
>seq14
Length=1507144
Score = 387 bits (428), Expect = 2e-102
Identities = 890/1325 (67%), Gaps = 55/1325 (4%)
Strand=Plus/Plus
Query 47934 ATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTG 47993
|||||| ||||| ||| | |||| || |||||||| || | |||||| ||
Sbjct 781168 ATTTCACAACATAAGTTAGAAGATTTAATTGTACCCAAGTTCTTTTGATTAGATTTTTTA 781227
Query 47994 TTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATA 48053
||||| || |||||||||| || ||||| || |||||||| | || | ||| | |||
Sbjct 781228 TTACAAGCATCCTTGTAAACAATGAAAGGAGTACCAGTTTCGGTTTGGGCTTCTAAGATG 781287
Query 48054 GATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTA 48113
| | ||| | | |||||| || |||| || || || |||||||||
Sbjct 781288 GCGTACCATAACTTTTGAGCCTTGATGGTCTTTCTACCTCTACCTTCTAGTTCGTATTGG 781347
Query 48114 GTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGA 48173
||| | ||| ||||| ||||| ||||| ||| || |||||| |||| |||||
Sbjct 781348 TCATAWAGCTTTTCAAAGTCATCACCATAAGCATCRCTCAAACCAGGAGCTTCACTAGGA 781407
Query 48174 CACATCAATGACCAATCCTCATCATTT---TTTACTCTAGTCATAAATATATCTGGTATC 48230
| | || | |||||| | ||||| || ||||| |||| || | || || |||
Sbjct 781408 GAGAATAAAGTCCAATC---ACCATTTGCCTTGACTCTCTTCATGAACAAGTCAGGAATC 781464
Query 48231 CAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGT 48290
|| | |||| |||||||| |||| ||| | |||||| || || ||| || | |
Sbjct 781465 CATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTTACCGTGATTTTTTCTGATG 781524
Query 48291 TCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGT 48350
|| | || || | ||||||| ||||||||||||| || | || | |||| |||
Sbjct 781525 TCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAGGTACAGAGCAAAGGCACCAGGT 781584
Query 48351 CGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGG 48410
| ||| ||||| |||||||| | |||||||||||| ||||| ||||||| | ||| ||
Sbjct 781585 CTTTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCTAACCATAGGA 781644
Query 48411 ACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTA 48470
| | |||||| || |||||||||| || | ||| ||| ||| | | ||| || ||
Sbjct 781645 ATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTAAGAGCCAGTGGATCTGATGTTG 781704
Query 48471 CTAAT-TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACA-CCGTTTAAGGG 48528
||| || || ||| |||||||| || | ||||| ||| ||||||| | || || ||
Sbjct 781705 TGAATGTGTAA-ACCAATACCACCKGCAGTCTTAGAAATTTGAGCACATTCCTTYAA-GG 781762
Query 48529 TATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTT 48588
||||||| || || || ||| |||||| ||||| | || |||||| ||||||||
Sbjct 781763 TATCATAGATACCGTCAATAGAATCATCCTTCATAGAAATTAAGAAACAAGAAGACATTT 781822
Query 48589 GCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTG 48648
| || ||| || | ||| |||| ||||||||| ||||| |||| || | | |
Sbjct 781823 GAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGCATGGGTAAAGTATCTTTGAG 781882
Query 48649 ATAACAATTTATATGTTTCAATAACAGAATCTAT-ATCCCATTGATGTATACCTATAGAT 48707
| | ||| || || ||||| || || || || | || | || ||||| | ||
Sbjct 781883 ACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTTCACCG-TGGATACCAACAGCA 781941
Query 48708 ACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATAT 48767
|| | ||| | || || ||| ||||||||||| || || ||| || ||||| | |||
Sbjct 781942 ACTCTCATRATCAAATGTTGTGGTCTTTCAACGATCTTACCATTGATCTTCAATAAGTAT 782001
Query 48768 GATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCGTTATCATTAATAA 48825
||| |||||||||| || ||||||||||||||||| ||||| || |||| ||||
Sbjct 782002 GATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGAAA--TCTCTATCRAAGATAA 782059
Query 48826 TTGATGAATTTATTCTTTCCTTATGTTT-ATA----TACTACATCCAT-----TACATTT 48875
| | | || || | || || ||||| ||| | || | ||| | ||
Sbjct 782060 TAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTTTATAAACATCATCAGAAATCA 782119
Query 48876 TTTGATATAA--------TTGATTC---------CTTGTAAAGATCTTCTACAACATCAC 48918
|| || | || || ||| ||||| | ||||| | ||| | |
Sbjct 782120 TTGGAGACAAAACACCATTTCTTTCGTTAACGTAGTTGTATAAGTCTTCGATAACTTGAG 782179
Query 48919 TAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAG 48978
||||| |||||| |||| || || | ||| || | ||||| || || | | ||
Sbjct 782180 AAAATAATTTTTTGGTTTGCTTGTGTAAGTTACTGATGGCAATTCTGGCGGCAAGAACAG 782239
Query 48979 CATAATCTGGATGAATTGTTGTACATGTA-CTAGATATTTCTGCTGCTAATATATCTAAT 49037
||||||| ||||||| || || |||||| | | |||| || ||||| ||||||||
Sbjct 782240 CATAATCAGGATGAACAGTGGT-CATGTAGGCACAAGTTTCAGCGGCTAAGTTATCTAAT 782298
Query 49038 TCTTTAGTAGTTACACCTGTATATATTCCTTGAATAACTTTCATT--GCTATATTTACTG 49095
|| | ||||| |||||| || | || |||| ||| || | || || || |
Sbjct 782299 TCGATGGTAGTAACACCTTCGTAGACACCGGAGATAA--TTCTTTGGGTGATTTTGACAG 782356
Query 49096 GATCTATATGATCCATATCCAGTCCATAACATAAtttttttATTCTAGATGTAATTTTAT 49155
|||| ||||| | ||| | |||||| |||||| | ||||| |||||||||||||
Sbjct 782357 GATCGATATGTTTAGCATCTAATCCATAGCATAATCTAGCAATTCTGGATGTAATTTTAT 782416
Query 49156 CAAACATTATATT--CTCTTTACGACCGTCACGTTTTATAACAAACATCTTTACTATAAA 49213
||| ||| | | |||| | ||||| | ||| | ||||||||| |||| || |||
Sbjct 782417 CAA--ATTGAACTGGAACTTTTCTTCCGTCTCTTTTAACAACAAACATGTTTA-TA-AAA 782472
Query 49214 AATAT 49218
||||
Sbjct 782473 GATAT 782477
Score = 114 bits (126), Expect = 1e-20
Identities = 475/745 (64%), Gaps = 23/745 (3%)
Strand=Plus/Plus
Query 47009 TTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCAT 47068
|| ||||| || || |||||||||||||| ||||| ||||| || ||||| |||||
Sbjct 780222 TTGTGTTCTCAAGTAGTACATACCAGTCTTCAAACCCTTGCTCCAACCGTAGAAGTGCAT 780281
Query 47069 ACTAGTTAATTTA-GAATAACTAGGTTC-TGAAATATGAATATTAAGAGATTGACTCTGA 47126
|||||| ||| ||| | || | || || ||||| || | || ||| |||
Sbjct 780282 GGAAGTTAACTTACCCATAGTTGGGGCCATG--ATGTGAATGTTCATGGAATGAGATTGA 780339
Query 47127 TCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCAT 47186
||||| || || ||||||||| |||||||| | ||| | |||||| || |||||
Sbjct 780340 TCAATGAAAGCTTGTCTATCAGCGGCCATATCAATGATAGTCTTTTGTGATAATTCCCAA 780399
Query 47187 ACTGTTTTATAAATTTGTTTAATGTCTTCTGGGA-GATTAGTA--TTTTGAATAGATCCT 47243
|| |||||||| | | || || |||| || | | || | | | ||| ||||| ||
Sbjct 780400 ACAGTTTTATACAAATCCTTCATTTCTTGAGGAATGTTTGGCAATTGTTGGATAGAACCA 780459
Query 47244 CCgttttctataatttt---gttttttaattcatttgaccaaagttttcgt-tcagttaa 47299
||| | || || || || | ||||| || || | | | ||| |||
Sbjct 780460 TTGTTAGCAATGATATTAGACTTCATGGCTTCAT----CCCAAATACCCATATCAACTAA 780515
Query 47300 tgtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGAT--AGTAC-TCTACGGCT 47356
|| || | | || || |||||||| |||| |||||| ||| | |||| |
Sbjct 780516 ATCCTTCAATAAGTATGGGTTGACAATTTGGTATTCACCAGATAAAGTTCTTCTAGAG-- 780573
Query 47357 ATATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGA 47416
|| || ||| || ||||||| | | ||||||| | || |||||||| | ||| ||
Sbjct 780574 -TACATGTTAGAAGTGAATGGTTCGAAACATTCATTGTAACCTAAAATTTGGGAAGTAGA 780632
Query 47417 TGCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNN 47476
|| || ||||| | ||||| |||||| ||||||| || | || ||||
Sbjct 780633 AGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAAACCGTGCTTGGCAATCTTAGC 780692
Query 47477 NNNNNNNNGTTTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAG 47536
|||||||||| | | |||| |||| ||||| ||||| ||||| |
Sbjct 780693 CTTCAATTCAGTCCAATCCCATARGGTAGTTGGAGCAACGTTCCAGAAATCGTATTGTAA 780752
Query 47537 AATTCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAG 47596
|| |||| | |||||||| | || | ||| | || | | || ||| |
Sbjct 780753 AACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCATAGGTTCCTTCAATTTCAGCTAA 780812
Query 47597 TTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATT 47656
|||| |||||||| ||| | ||| || ||||| || |||| ||||| | |||
Sbjct 780813 TTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGGTTTCGAAAATTTGAATGTTCA-ATT 780871
Query 47657 CCTT-GCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTT 47715
| || |||| | || || || ||| || ||||| ||||| ||||
Sbjct 780872 CYTTGGCTTTTTCAGAATCGAATGGAACTCTTAACATCATAAAAGTATCAGCCAAACCTT 780931
Query 47716 GAACACCAATACCAATTGGTCTATG 47740
||||||| | |||| ||||| ||
Sbjct 780932 GAACACCTACGGCAATAGGTCTGTG 780956
>seq1
Length=1289090
Score = 360 bits (398), Expect = 2e-94
Identities = 631/908 (69%), Gaps = 16/908 (2%)
Strand=Plus/Minus
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
|||||||| || | |||||| |||||||||||||| || || || |||| ||||| |
Sbjct 688537 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 688478
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||||| || ||||| || | ||||| | | |||| | ||||| | | || |
Sbjct 688477 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAAT 688418
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
| |||||| || ||||||| || |||| |||||| | |||| |||||| || | ||||
Sbjct 688417 AATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAAT 688358
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAAT-TCTTGTTCTATATTTACTGCCTCTGATATAAT 18908
||| || | ||||| || || |||| ||| || | || || || | |||||
Sbjct 688357 GCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAAT 688299
Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTA-TAGAAGATGTTTAAACATCAAACATGCAA 18967
| ||| | | | || || || | ||| || |||| | ||| ||||
Sbjct 688298 TCTTTCAATGATCTTTGGATCTGGCTTGTTCTTTAAG-TGRGAGAACAATAGACAGGCAA 688240
Query 18968 AATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCA 19027
| ||| ||||| || || ||||||| |||||||| || || || || ||||||||||
Sbjct 688239 AGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGGCA 688180
Query 19028 TCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTT 19087
||| || |||| || |||||||| |||| ||||||||| ||||| || || | |||||
Sbjct 688179 TCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACCTT 688120
Query 19088 CTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATT 19147
| || || ||||||||||| |||||||| || | ||| || |||| |||||||||
Sbjct 688119 CAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCATC 688060
Query 19148 TCAGTGCCCAATCAGCCTT---CTTTTTTACACATGGCATTGTCTCTATAGAATTAAATA 19204
| | ||||| |||||||| ||| || || || || || ||||||| || ||||
Sbjct 688059 TAATAGCCCATTCAGCCTTTTCCTTAATTTCA---GGAATAGTTTCTATAGCGTTTAATA 688003
Query 19205 GATACAT-ACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCT 19263
| | || | || | || ||| || | |||| |||| |||||| || ||||
Sbjct 688002 -AGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTCA 687944
Query 19264 GAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGT 19323
|| ||||| ||||| || || || || ||||| ||||| | ||||||| || ||
Sbjct 687943 GAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGA 687884
Query 19324 ACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAA 19383
|||||| | | || |||| ||||| |||||||| || || |||||| ||| |||||
Sbjct 687883 ACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAG 687824
Query 19384 AATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAAT---GTATTCCAATCA 19440
|| || || || | ||| ||| | |||||| | | | | ||||||||||
Sbjct 687823 AAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCG 687764
Query 19441 TTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTA 19500
| | ||| ||||| ||||| | ||||||| | ||||| |||||||| || ||| | |||
Sbjct 687763 TGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTA 687704
Query 19501 TACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCT 19560
|| | ||| || || | ||| || || |||| ||| ||||| |||| ||||||
Sbjct 687703 TAGGCTTCCCAAATTTCTGGGAATTTGATTGGGAATAAAACGAATCTTCTTTTGTTTTCT 687644
Query 19561 -TTAAGAA 19567
|||| ||
Sbjct 687643 GTTAATAA 687636
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108673525520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |