Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1 233 2e-56 >seq1 Length=1289090 Score = 233 bits (258), Expect = 2e-56 Identities = 549/823 (67%), Gaps = 17/823 (2%) Strand=Plus/Minus Query 36885 TTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTT 36944 |||||||| || ||||| |||| || ||||| ||||| || ||| ||||| ||| Sbjct 688537 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 688478 Query 36945 TCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGA--TAATTCCTTCA 37002 |||||||| || ||||| || | ||| | | | | | | | ||| | | Sbjct 688477 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTT--TTCGTTACCTAAGGCAACTA 688420 Query 37003 GAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTA 37062 | ||||| ||||||||||| | |||| |||||| ||| || ||||||| || Sbjct 688419 ATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTA 688360 Query 37063 GTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTA 37122 | |||||||| ||||| || || ||||| ||| ||||| || || | Sbjct 688359 ATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAATAA 688300 Query 37123 TATTAACAATAACTTCTTCAGTTGGGGGATATT--TTAAATATTTAAACAATAAACATGC 37180 | | |||| | |||| | | || | || |||| | ||||||| ||| || Sbjct 688299 TTCTTTCAATGA--TCTTTGGATCTGGCTTGTTCTTTAAGTGRGAGAACAATAGACAGGC 688242 Query 37181 AAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGG 37240 ||| ||| |||||||||||||||||||| |||||||| || || || || || || || Sbjct 688241 AAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGG 688182 Query 37241 CATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACC 37300 ||| ||||| |||| || | ||| || || || ||||| || ||||| || || | ||| Sbjct 688181 CATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACC 688122 Query 37301 TTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCA 37360 |||||| || ||||| || || || | | | | || | | ||| |||||| Sbjct 688121 TTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCA 688062 Query 37361 tttttttGTCCAATCTGCCTTTAATTTAACACATTC---AATTGTTTCAATTGCTTTTAA 37417 | | | | ||| || |||||| |||| ||| ||| ||||| || || ||||| Sbjct 688061 TCTAATAGCCCATTCAGCCTTTTCCTTAA---TTTCAGGAATAGTTTCTATAGCGTTTAA 688005 Query 37418 GAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTC 37477 | || | ||||| | ||| | || || || || | || |||| ||| |||| Sbjct 688004 TAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTC 687945 Query 37478 AGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTG 37537 ||||||||| ||||| || || || ||||| || |||||| ||||||| | | ||| Sbjct 687944 AGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTG 687885 Query 37538 AACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAA 37597 ||| || | | || | | | | ||||||||||| || || |||||| ||| ||||| Sbjct 687884 AACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAA 687825 Query 37598 GAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCATTTGATAATTTTTTCCAATC 37654 |||||| | || | || ||| ||||||| ||||| | || |||||||| Sbjct 687824 GAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATC 687765 Query 37655 ATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAA 37697 | | ||| || || ||||| | ||| ||| ||||||| ||| Sbjct 687764 GTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAA 687722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316666728720