Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq16 158 1e-33 seq18 143 2e-29 seq15 132 4e-26 >seq16 Length=726111 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | ||| |||| ||| || || ||||||||||| || |||||||| | Sbjct 202566 CCACCTCTTAATCTTAAGACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGAT 202507 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| |||| || ||||| ||||| || || ||||| | |||||||| || ||| Sbjct 202506 AATGTTCTACCATCTTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAGGA 202447 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| |||||||| ||||| ||| ||| || | || |||| | ||| ||| Sbjct 202446 ATACCTTCCTTATCTTGGATTTTAGATTTGACAGCGTCGATAGAGTCACTAGATTCAACT 202387 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || | ||||| || || || ||||||||||| ||||| || ||||| || Sbjct 202386 TCTAAAGTGATGGTCTTACCAGTTAAAGTTTTAACAAAGATTTGCATTGT 202337 >seq18 Length=436904 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || |||||||| | ||| ||||| || | || ||||||||||| || ||||| || | Sbjct 25614 CCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAT 25555 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| || ||||||||||| || || || || | |||||||| || ||| Sbjct 25554 AAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGA 25495 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| ||||| ||||| || ||| | || | || ||||| | ||| || Sbjct 25494 ATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACC 25435 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||| | || || || |||| ||||||||| || || ||||| Sbjct 25434 TCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCAT 25388 >seq15 Length=137011 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| || | || |||||| || || |||||||||||||| || |||||||| | Sbjct 38888 CCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGAT 38947 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| | || || ||||| ||||| ||||| || || | |||||||| || ||| Sbjct 38948 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGA 39007 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || ||||| || || || ||| || | ||| |||| | ||| ||| Sbjct 39008 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGACT 39067 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAA 101460 || | ||||| || || |||||||| || || ||||| Sbjct 39068 TCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAA 39105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396278313066426