Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq18 127 2e-24 seq16 109 5e-19 seq15 105 6e-18 >seq18 Length=436904 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 ||||||||||| || |||||||| |||| ||||| |||||||| || ||| || Sbjct 25385 AAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCT 25444 Query 28611 TCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGAT 28670 || || | | | | || | ||| |||||| |||||||| || | || ||| Sbjct 25445 TCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGAT 25504 Query 28671 CAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 28730 ||||| ||| | ||||| || || || ||||| |||||| || |||| | | || || Sbjct 25505 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 25564 Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||||||||||||||| ||| | ||| | || ||||||||| |||| || Sbjct 25565 AACATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATTAAGAGGTGG 25614 >seq16 Length=726111 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| ||||| ||||| ||||| ||||| ||||| || ||| ||| || Sbjct 202339 AATGCAAATCTTTGTTAAAACTTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTAG 202398 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || | | | || | |||| |||||| || || || || | || ||||| Sbjct 202399 TGACTCTATCGACGCTGTCAAATCTAAAATCCAAGATAAGGAAGGTATTCCTCCTGATCA 202458 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| ||| | || || || || |||||||| |||||| || ||| | | ||||| || Sbjct 202459 ACAAAGATTGATTTTCGCCGGTAAACAATTAGAAGATGGTAGAACATTATCTGATTACAA 202518 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||||||||||||| ||||| || | || ||||||||| |||| || Sbjct 202519 CATTCAAAAAGAATCCACTCTCCATCTAGTCTTAAGATTAAGAGGTGG 202566 >seq15 Length=137011 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 28563 TTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCAGAGACGGTG 28622 ||||| || || ||||| ||||| ||||| || ||| ||| || | || || | Sbjct 39105 TTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTATT 39046 Query 28623 GCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTT 28682 | || | ||||| || ||| ||||| || || | || |||||||| ||| | Sbjct 39045 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 38986 Query 28683 ATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAA 28742 |||||||| || |||||||| ||||| || ||| | | ||||| ||||| |||||| Sbjct 38985 ATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAA 38926 Query 28743 GAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780 ||||||||||| ||| | || ||||||| |||| || Sbjct 38925 GAATCTACTCTACACTTAGTTCTAAGATTGAGAGGTGG 38888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425404706676822