Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq14 208 4e-49 >seq14 Length=1507144 Score = 208 bits (230), Expect = 4e-49 Identities = 438/649 (67%), Gaps = 7/649 (1%) Strand=Plus/Plus Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951 ||| |||||||| ||||||| ||||| || ||| ||| ||| || || || |||||| Sbjct 781405 GGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCTCTTCATGAACAAGTCAGGAATC 781464 Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011 || | || ||||||||||| ||||| |||||||| || |||||||| ||| | | Sbjct 781465 CATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTTACCGTGATTTTTTCTGATG 781524 Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071 || | ||||||||| ||||| |||||||||||||||| || | |||||| ||| | Sbjct 781525 TCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAGGTACAGAGCAAAGGCACCAGGT 781584 Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131 ||||| ||||||||||| || ||||| ||||| | ||||||||| | | ||| ||| Sbjct 781585 CTTTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCTAACCATAGGA 781644 Query 26132 ACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCG 26191 | || ||| | ||| || || || | | ||| | || || || ||||| || | | Sbjct 781645 ATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTAAGAGCCAGTGGATCTGATGTTG 781704 Query 26192 TGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTA 26251 ||| || | ||| || ||||| || || ||||| ||||| || | ||| Sbjct 781705 TGAATGTGTAAACCAATACCACCKGCAGTCTTAGAAATTTGAGCACATTCCTTYAAGGTA 781764 Query 26252 TCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGC 26311 || | || || | || |||| | ||||| | ||| ||||||||||| | ||| Sbjct 781765 TCATAGATACCGTCAATAGAATCATCCTTCATAGAAATTAAGAAACAAGAAGACATTTGA 781824 Query 26312 GAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTCACTC 26371 | | || || | ||| |||| ||| || | |||||| ||| | |||| || | | Sbjct 781825 GGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGCATGGGTAAAGTATCTTTGAGAC 781884 Query 26372 A--AAGCTGTATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAATAGCTG 26429 | ||| || |||||||| | |||| || || || | | | ||| ||| Sbjct 781885 ATCAAGTTG--TAAGTTTCGATGACTTTTTCAATGTTTTCACCGTGGATACCAACAGCAA 781942 Query 26430 TTCTTAACCACATATATTGAGGTCGTTCAATTACATTATTTTCCGCATCTCTAATCAAAT 26489 ||| | || || ||| |||| ||||| | ||| | |||| ||| || | Sbjct 781943 CTCTCATRATCAAATGTTGTGGTCTTTCAACGATCTTACCAT--TGATCTTCAAT-AAGT 781999 Query 26490 AAGATTTTTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATCTCT 26538 | ||| |||| || || || || |||||||| | | ||||||||||| Sbjct 782000 ATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGAAATCTCT 782048 Score = 93.3 bits (102), Expect = 2e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 25017 ATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCAT 25076 |||| ||||| ||| |||||| | | ||| |||||||||||||| |||||||||| Sbjct 780548 ATTCACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCGAAACATTCAT 780607 Query 25077 TATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTTC 25136 | | ||||| ||||| |||||||| || |||||||| || | |||| || |||| Sbjct 780608 TGTAACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTC 780667 Query 25137 TCAAACCATATTTAACAATCT 25157 | ||||| | || |||||| Sbjct 780668 TTAAACCGTGCTTGGCAATCT 780688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039944489350