Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq16 161 2e-34
seq18 159 6e-34
seq15 129 1e-24
>seq16
Length=726111
Score = 161 bits (178), Expect = 2e-34
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
||||||||| |||| | || ||||| | || | ||||| ||| || || || ||
Sbjct 202567 ACCACCTCTTAATCTTAAGACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGA 202508
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
||| |||||| ||| ||||||||||| ||||| ||||| ||||| ||||||||||||||
Sbjct 202507 TAATGTTCTACCATCTTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAGG 202448
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| ||||| |||||||| ||||| | ||| | | |||| || ||| |||||
Sbjct 202447 AATACCTTCCTTATCTTGGATTTTAGATTTGACAGCGTCGATAGAGTCACTAGATTCAAC 202388
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361
||||| ||| || || ||||| |||| ||||| ||||| |||||||||
Sbjct 202387 TTCTAAAGTGATGGTCTTACCAGTTAAAGTTTTAACAAAGATTTGCATT 202339
>seq18
Length=436904
Score = 159 bits (176), Expect = 6e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
||||||||| |||| | || | || || || | ||||| ||| || ||||| ||
Sbjct 25615 ACCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 25556
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
||| |||||| ||| |||||||| || || || || |||||||| ||||||||||| ||
Sbjct 25555 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGG 25496
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| |||||||| ||||| ||||| | || | ||| |||| ||| ||||| || ||
Sbjct 25495 AATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGAC 25436
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
|| | ||| || || ||||| ||||| |||||||| || |||||||||||
Sbjct 25435 CTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 25385
>seq15
Length=137011
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||||||||||| || || | || | |||| ||||| || || || || ||
Sbjct 38887 ACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGA 38946
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
||| |||||| || ||||||||||| || ||||| |||||||| ||||||||||| ||
Sbjct 38947 TAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 39006
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| ||||| || ||||| || |||| || | | |||||| || | ||| || ||
Sbjct 39007 AATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGAC 39066
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAA 193351
||| | ||| || || ||||| |||| || || |||||
Sbjct 39067 TTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAA 39105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899654197577760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |