Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq1 223 5e-53
seq16 152 8e-32
seq18 143 4e-29
seq15 96.9 5e-15
>seq1
Length=1289090
Score = 223 bits (246), Expect = 5e-53
Identities = 550/824 (67%), Gaps = 24/824 (3%)
Strand=Plus/Minus
Query 17879 ACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAATTCATAAAATCAAAT 17938
||| | || || |||||||| ||||| || | || ||||| | |||||| || |||
Sbjct 688522 ACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTTTCCATAAAGTCGAAT 688463
Query 17939 GGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTATAATAATCTATCTGCTACA 17998
|| || ||| || | ||||| | ||| | |||||||||||| || |||
Sbjct 688462 GGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAATAATCTATCAGCAACA 688403
Query 17999 AATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGTAGTCTGAAAGGTAGAGCA 18058
||||| |||||||| ||| | ||| ||||||||| |||| | | || | |||
Sbjct 688402 AATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAATGCAACTGGAATGGCA 688343
Query 18059 TCAATAATAAAT-TCTTTCTCTATCTCAACAGACTCTTTTATTATGTTT---ATTACCCT 18114
|||| || || ||||| || || ||||||| || || || || || | | |
Sbjct 688342 TCAACAAAGTATCTCTTT-TCAATTTCAACAGCTTCAGCAATAATTCTTTCAATGATCTT 688284
Query 18115 AGATTTTGGCAATTTATTAATTATGTGATTATAATATAATAAACACGCAAAATCAGTGTG 18174
| | |||| || || ||| ||| | | |||| ||| ||||| ||||| ||
Sbjct 688283 TGGATCTGGC---TTGTTCTTTAAGTGRG---AGAACAATAGACAGGCAAAGTCAGTATG 688230
Query 18175 TAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTATACCTCt 18234
||||||||||||||| | || |||||||| || || || || ||||| | ||| |
Sbjct 688229 TAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGGCATCAAACCCTT 688170
Query 18235 tttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATATACCCTCAAC-GCACG 18293
||| || | ||| || || | || || || ||| || || | ||| ||||| ||| |
Sbjct 688169 TTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACCTTCAACAGCA-G 688111
Query 18294 CGAACGCTATTAATCTTTCAGCA---AAACTGTATTTATTGCTCAGTATCCATTTTTGTG 18350
| || || | | |||||||||| ||| || |||| || | |||||| | |
Sbjct 688110 CAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTAT--CT-TGAATCCATCTAATAG 688054
Query 18351 CCCATTC-TCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTAAACAAATCATCT 18409
||||||| |||| | || || ||| | |||||||| || || || |||
Sbjct 688053 CCCATTCAGCCTTTTCCTTAATTTCA-GGAATAGTTTCTATAGCGTTTAATAAGAAATCA 687995
Query 18410 TTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATG 18469
||||| || | ||| || || || ||||| | ||| |||||||| ||||||| || |||
Sbjct 687994 TTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTCAGAGTGAATG 687935
Query 18470 CTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTA 18529
||||||| || || |||| || || | |||| || ||| ||||| || |
Sbjct 687934 TTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGAACTTCAGCA 687875
Query 18530 TAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAA 18589
| || |||| ||||| || ||||| || ||||| |||| || || || || |||||
Sbjct 687874 GAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAGAAAGCCAAK 687815
Query 18590 ACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATTGTTCCATTCATCTATATCT 18646
|| | ||||||| | ||||||| || || | || ||||| || | || |||
Sbjct 687814 ACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTGTAAATCC 687755
Query 18647 TTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGC 18690
|| || | ||| | |||||| | ||||| ||||| | ||||||
Sbjct 687754 TTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGC 687711
>seq16
Length=726111
Score = 152 bits (168), Expect = 8e-32
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| ||| ||||||| || ||||| || || || || |||||||| ||| |
Sbjct 202339 AATGCAAATCTTTGTTAAAACTTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTAG 202398
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||| ||| || ||| |||||| |||||||| ||||| || ||||| || ||
Sbjct 202399 TGACTCTATCGACGCTGTCAAATCTAAAATCCAAGATAAGGAAGGTATTCCTCCTGATCA 202458
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||||||||||| |||||||| || | |||||| ||||| ||||| ||||| ||
Sbjct 202459 ACAAAGATTGATTTTCGCCGGTAAACAATTAGAAGATGGTAGAACATTATCTGATTACAA 202518
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| | || || ||| |||| |||||||||||||| |||
Sbjct 202519 CATTCAAAAAGAATCCACTCTCCATCTAGTCTTAAGATTAAGAGGTGGT 202567
>seq18
Length=436904
Score = 143 bits (158), Expect = 4e-29
Identities = 171/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
||||||||||| || | ||||| | ||||| || || ||||| || || |||||| |
Sbjct 25385 AAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCT 25444
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|||||| ||| || || || |||||| ||||| |||||||| || || || ||
Sbjct 25445 TCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGAT 25504
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
||||||||||| || | || |||||||| | |||||| ||||||||||| || ||
Sbjct 25505 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 25564
Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
|| || ||||| | || | || ||||| |||||||||||||| ||||
Sbjct 25565 AACATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATTAAGAGGTGGTG 25616
>seq15
Length=137011
Score = 96.9 bits (106), Expect = 5e-15
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | || || || || || || || || || || ||||||||| | |||| | ||||
Sbjct 39105 TTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTATT 39046
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
|| || || || ||||| || ||||| || || || || |||||||||||
Sbjct 39045 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 38986
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | ||| ||||| || | ||||| ||||| ||||| ||||| || || |||
Sbjct 38985 ATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAA 38926
Query 156012 GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTGT 156052
|| | || || || ||||| ||||||| ||||| |||||
Sbjct 38925 GAATCTACTCTACACTTAGTTCTAAGATTGAGAGGTGGTGT 38885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871835328800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |