Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq1 167 4e-36
seq16 154 3e-32
seq15 141 2e-28
>seq1
Length=1289090
Score = 167 bits (184), Expect = 4e-36
Identities = 366/543 (67%), Gaps = 11/543 (2%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
||||| || ||||||||| | ||||| || || || || || || |||| |||||
Sbjct 688537 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 688478
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATC-AATACATATAA 38950
| |||||| || ||||| || || ||| | ||||| || | || || |||
Sbjct 688477 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGT-TACCTAAGGCAACTAA 688419
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
||||||||| || ||||||||||||||||| ||||| ||| ||||||||| | |||
Sbjct 688418 TAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAA 688359
Query 39011 TTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattat 39070
| || ||| | |||||| ||| || ||||| ||||| ||||||| ||| ||
Sbjct 688358 TGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAATAAT 688299
Query 39071 cataattatattattttttgat---aatttatatttaatatgattcgcatataGTAAACA 39127
| || || || ||| ||| || | ||||| || | | | || |||
Sbjct 688298 --TCTTTCAATGATCTTTGGATCTGGCTTGTTCTTTAA-GTGR---GAGAACAATAGACA 688245
Query 39128 TGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 39187
||||| || |||||||||||||| || ||| | || ||||| || ||||| || ||
Sbjct 688244 GGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACC 688185
Query 39188 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 39247
||||| || || | || || | ||| || || | ||||| || ||| || || |
Sbjct 688184 AGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGAC 688125
Query 39248 ACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAAT 39307
||| || ||| ||||| || | | |||| | |||||| | | |||| |||
Sbjct 688124 ACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAAT 688065
Query 39308 CCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAA 39367
||| | || ||||| || || |||| || || ||| ||| |||||||||| || ||
Sbjct 688064 CCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAA 688005
Query 39368 TAA 39370
|||
Sbjct 688004 TAA 688002
>seq16
Length=726111
Score = 154 bits (170), Expect = 3e-32
Identities = 174/231 (75%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
||||||||| | || ||| |||| ||| | ||| | ||||| ||| || ||||| ||
Sbjct 202567 ACCACCTCTTAATCTTAAGACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGA 202508
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
||| | || | || || ||||||||||| || ||||| ||||| ||||| ||||| ||
Sbjct 202507 TAATGTTCTACCATCTTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAGG 202448
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACA--TTAGTTATAGTATCTGACGATTCT 172019
|| ||||| |||||||| |||||| ||| ||| | | || ||| || |||||
Sbjct 202447 AATACCTTCCTTATCTTGGATTTTAGATTTGACAGCGTCGATAGAGTCACT--AGATTCA 202390
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||||| ||| ||||| ||||||||||| ||||||| || || ||||||
Sbjct 202389 ACTTCTAAAGTGATGGTCTTACCAGTTAAAGTTTTAACAAAGATTTGCATT 202339
>seq15
Length=137011
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|||| ||||||||| | || || ||||| |||| ||||| ||||| || || |||
Sbjct 38882 ATAACACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAA 38941
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| ||||| | || |||| || ||||||||||||||||| |||||||| ||||| |||
Sbjct 38942 TCAGATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCA 39001
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| || ||||| || || || ||| ||||| || | |||
Sbjct 39002 GGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGAT 39061
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054
|| ||||| | ||| ||||| ||||| ||||| || ||
Sbjct 39062 TCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTCTT 39099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135796344400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |