Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq16 120 3e-22
seq15 109 5e-19
seq18 104 2e-17
>seq16
Length=726111
Score = 120 bits (132), Expect = 3e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760
|| ||||| |||||| ||||||| |||| ||||| || || || | ||||| ||| |
Sbjct 202337 ACAATGCAAATCTTTGTTAAAACTTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCT 202396
Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820
| ||| | | || | || ||| || |||||||| || ||||| || ||||| |||
Sbjct 202397 AGTGACTCTATCGACGCTGTCAAATCTAAAATCCAAGATAAGGAAGGTATTCCTCCTGAT 202456
Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880
|||||| | ||||| || ||||| ||||| | || ||| |||| | || |||||
Sbjct 202457 CAACAAAGATTGATTTTCGCCGGTAAACAATTAGAAGATGGTAGAACATTATCTGATTAC 202516
Query 24881 AACATTCAAAAGGAATCGACACTACA 24906
||||||||||| ||||| || || ||
Sbjct 202517 AACATTCAAAAAGAATCCACTCTCCA 202542
>seq15
Length=137011
Score = 109 bits (120), Expect = 5e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 24713 TTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTA 24772
||| | || || |||||||||| || || || | ||||| ||| | | || || |
Sbjct 39105 TTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTATT 39046
Query 24773 GAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTG 24832
|| | || || |||||||||||||| ||||| || || || ||||||||| | ||
Sbjct 39045 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 38986
Query 24833 ATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAG 24892
|||||||| || ||||| | || || |||| | | || ||||| ||||| |||||
Sbjct 38985 ATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAA 38926
Query 24893 GAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| || |||||||| || | ||||| | || ||
Sbjct 38925 GAATCTACTCTACACTTAGTTCTAAGATTGAGAGGTGG 38888
>seq18
Length=436904
Score = 104 bits (114), Expect = 2e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | ||||| ||||| ||||| || ||||| | || || ||| | |
Sbjct 25388 ATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTCT 25447
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| | | || || | ||| | ||| ||||||||||||||||| || || || |||||
Sbjct 25448 GATTCTATCGACAATGTTAAGGCTAAA-ATCCAAGACAAAGAAGGTATTCCACCTGATCA 25506
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | || ||||| || || || || | || ||| |||| | || || || ||
Sbjct 25507 ACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAA 25566
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
||||||||| ||||| || ||||||| || || ||||
Sbjct 25567 CATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATT 25605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897498773040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |