Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq18 167 4e-36
seq16 167 4e-36
seq15 127 3e-24
>seq18
Length=436904
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| ||||||| |||| || || || |||||| | || || ||| | |
Sbjct 25389 TGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTCTG 25448
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|| |||| | ||||| || |||||| ||| |||||||| |||||||| |||||||
Sbjct 25449 ATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGATCAAC 25508
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | || || || ||||| |||||||| ||| |||||| ||| | || || || |
Sbjct 25509 AAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAACA 25568
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
| ||||||||||| ||| | || ||||| ||| |||||||||| |||
Sbjct 25569 TTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATTAAGAGGTGGT 25615
>seq16
Length=726111
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | ||||| ||||| || || || || ||| | || || ||| || |
Sbjct 202341 TGCAAATCTTTGTTAAAACTTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTAGTG 202400
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||| | ||| ||| |||||| ||| ||| ||||| ||||| || |||||||
Sbjct 202401 ACTCTATCGACGCTGTCAAATCTAAAATCCAAGATAAGGAAGGTATTCCTCCTGATCAAC 202460
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | ||||| || |||||||||||||| ||| |||||| ||| | ||||| || |
Sbjct 202461 AAAGATTGATTTTCGCCGGTAAACAATTAGAAGATGGTAGAACATTATCTGATTACAACA 202520
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
| ||||||||||| ||| ||||| |||| ||| |||||||||| |||
Sbjct 202521 TTCAAAAAGAATCCACTCTCCATCTAGTCTTAAGATTAAGAGGTGGT 202567
>seq15
Length=137011
Score = 127 bits (140), Expect = 3e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105
|| || ||||| || || || || ||| | || || ||| | || |||||| | |
Sbjct 39099 AAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTATTGACGCT 39040
Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165
|| || || || ||| || ||||| |||||||| |||||||||||| | || |||
Sbjct 39039 GTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTAATCTTT 38980
Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225
|| |||||||||||||| || |||||| ||| | ||||| || || |||||||||||
Sbjct 38979 GCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAAGAATCT 38920
Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGT 146258
||| | || ||||| || |||| ||||| |||
Sbjct 38919 ACTCTACACTTAGTTCTAAGATTGAGAGGTGGT 38887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786166223112560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |