Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq16 145 6e-30 seq15 127 2e-24 seq18 122 7e-23 >seq16 Length=726111 Score = 145 bits (160), Expect = 6e-30 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 ||| || |||||||||||||||||||| ||||| | | || | | ||| || | ||| Sbjct 202543 ATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGATAATGTTCTACCATCTTCTAATTG 202484 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||| || || | ||||||||||| ||||| || |||||||| || || ||||| | ||| Sbjct 202483 TTTACCGGCGAAAATCAATCTTTGTTGATCAGGAGGAATACCTTCCTTATCTTGGATTTT 202424 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 |||||||| || | || |||| | ||| ||||| | ||| || || || ||||| Sbjct 202423 AGATTTGACAGCGTCGATAGAGTCACTAGATTCAACTTCTAAAGTGATGGTCTTACCAGT 202364 Query 29763 TAAGGTTTTAACAAATATCTGCATT 29787 ||| ||||||||||| || |||||| Sbjct 202363 TAAAGTTTTAACAAAGATTTGCATT 202339 >seq15 Length=137011 Score = 127 bits (140), Expect = 2e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || || || || || || ||||||||||| ||||| ||||| | Sbjct 38888 CCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGAT 38947 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | | || || | |||||| |||||| | || |||||||| ||||| || ||| Sbjct 38948 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGA 39007 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || |||||||| | || ||||||| || | ||| |||| | ||| ||| Sbjct 39008 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGACT 39067 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777 || | ||| || || || || |||||||| || ||||| Sbjct 39068 TCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAA 39105 >seq18 Length=436904 Score = 122 bits (134), Expect = 7e-23 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649 |||||||||||||||||||| || || | | || | | ||| || | ||| || ||| Sbjct 25584 GTGGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCA 25525 Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709 || | || |||||||| ||||| || |||||||| ||||||||||| | ||| || Sbjct 25524 GCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGGATTTTAGCCTTA 25465 Query 29710 ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTT 29769 ||| | || | || |||||| ||| || || | ||| || || || ||||||| ||| Sbjct 25464 ACATTGTCGATAGAATCAGAAGATTCGACCTCCAAAGTAATGGTCTTACCAGTTAGAGTT 25405 Query 29770 TTAACAAATATCTGCATTTT 29789 || || || || |||||||| Sbjct 25404 TTTACGAAAATTTGCATTTT 25385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385219115492538