Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq12 145 1e-29
seq14 93.3 5e-14
>seq12
Length=1055690
Score = 145 bits (160), Expect = 1e-29
Identities = 210/297 (71%), Gaps = 0/297 (0%)
Strand=Plus/Plus
Query 168581 AGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTAC 168640
||| || ||| ||||| | | ||||||||||||| ||| |||||| ||| || ||
Sbjct 820168 AGGCGTCAAAATTTGGGATGGTAATGGTTCTCGTSAATACCTAGATTCTCTTGGGTTAAC 820227
Query 168641 CGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGC 168700
|| ||| ||||||||||||||||||| ||||||| || |||||||||||| || ||
Sbjct 820228 TGACAGAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACATTTTGGTGC 820287
Query 168701 TCAATATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAAAC 168760
| ||||| |||| ||| | || || ||||| ||||| || |||||||| | |
Sbjct 820288 TGAATATGTTGATTGTCACACTGACTACACAAACAAAGGATACGATCAATTAAGCGATAT 820347
Query 168761 TATAAATACTTTACACAACAATCCGGAAAATAGAAGAATATTAATTAATAGTTGGGATGT 168820
|| ||| || | | |||||| | |||||||||| | || | |||| ||
Sbjct 820348 AATTCATAAGTTGAAGACCAATCCTTACGATAGAAGAATCATCATGTCTGCTTGGAATCC 820407
Query 168821 ACCACAACTTGATAAAATGGTTCTTCCCCCTTGTCACACTTTAGTGCAATTTTATGT 168877
|||| | || | ||||||| |||||| || || ||| ||| ||||| |||||
Sbjct 820408 ACCAGACTTTAAGAAAATGGCTCTTCCGCCATGCCACGTTTTCTGTCAATTCTATGT 820464
Score = 93.3 bits (102), Expect = 5e-14
Identities = 185/268 (69%), Gaps = 7/268 (3%)
Strand=Plus/Minus
Query 192852 CAATCTGCTCGAAACTGTTTTTATACTTCTATGGTTAAACAAGCCATTGGATTTATTCCG 192911
|||||| || |||| || | | || |||||| ||| |||||||| || || | |
Sbjct 610541 CAATCTCCTAGAAATACTTATCAATCTGCTATGGGTAAGCAAGCCATGGGTGTTTTCTTG 610482
Query 192912 TGTCAC---AACTTAAAAACGGAAACAGTATCTCATACATTAAATTATCCACAAAAACCC 192968
| || ||||| | || ||| || | || ||| || | || |||||||| ||
Sbjct 610481 ACTAACTATAACTTTAGAATGGATACCATGGCTAATATTTTGTACTACCCACAAAAGCCT 610422
Query 192969 CTTGTTACCAC-AGAT-ATTGCAAAATTTAATAAATTAGACGATTATCCAAATGGTATTA 193026
| | ||| || ||| | || || |||| | || | ||| |||| || |||| |
Sbjct 610421 TTAGGTACTACCAGAGCAATGGAACATTTGA-AATTCAGA-GATTTACCTGCTGGTCAGA 610364
Query 193027 ATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGAAGACAGTATTATTTTAA 193086
|||||||||| ||||| || || ||| |||| |||||||||||||| || ||| | |
Sbjct 610363 ATGCTATTGTAGCTATTGCATGTTATTCTGGATATAATCAAGAAGATTCCATGATTATGA 610304
Query 193087 ATAAAGCTTCTATTGAAAGAGGATTATT 193114
|| || | |||||||| ||||| |||||
Sbjct 610303 ATCAATCATCTATTGATAGAGGTTTATT 610276
Score = 89.7 bits (98), Expect = 7e-13
Identities = 164/235 (70%), Gaps = 11/235 (5%)
Strand=Plus/Plus
Query 51830 AACACTTG-AAGTTGGAGACTTGGTTAAAAGACA-ATTGATGGATGGTGATGATGTACTA 51887
|||| ||| || |||| || | ||| ||||||| || || | |||||||| ||| ||
Sbjct 912366 AACAATTGCAAATTGGGGATATTGTTGAAAGACATATAGAAG-ATGGTGATATTGTTTTA 912424
Query 51888 TTAAATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAA 51947
|| ||||| || || | | |||| | ||||| | | | | ||||||| |
Sbjct 912425 TTYAATAGACARCCTTCTTTGCATAGACTATCTATCTTATCCCATTATGCTAAAATTAGA 912484
Query 51948 CCAGTAAAAACATTTA----AAATGAATTTGGCTATGACTAAAGCATATAATGCTGATTT 52003
|| | |||||| | ||| |||| || | || || | ||||||| ||||||||
Sbjct 912485 CCTTGGAGAACATTCAGATTAAACGAATGTG--TTTG--TACACCATATAACGCTGATTT 912540
Query 52004 TGATGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGAA 52058
|||||| ||||||||||||||||||||||| ||| | | | ||||| || |||
Sbjct 912541 TGATGGTGATGAAATGAATTTACATGTTCCACAAACTGAAGAAGCTAGAGCCGAA 912595
>seq14
Length=1507144
Score = 93.3 bits (102), Expect = 5e-14
Identities = 159/225 (71%), Gaps = 8/225 (4%)
Strand=Plus/Minus
Query 193827 AAACATATGGTTAAGGATAAAATGCATGCTAG---AAGTCATGGACAAGTGACTACTTTA 193883
|||||||||||| |||||| |||||||| || ||| | | |||| | || |||
Sbjct 1414184 AAACATATGGTTTTGGATAAGATGCATGCAAGAGCAAG--AGGTCCAAGAG-CTGTCTTA 1414128
Query 193884 CATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAG 193943
| ||||||| | ||| | ||| || ||| ||||| ||||| || ||||||||
Sbjct 1414127 ACTAGACAACCTACGGAAGGTAGATCTAGAGATGGTGGTTTGAGATTAGGTGAAATGGAA 1414068
Query 193944 AAAGACTGTATTTTAGTTCATGGTGCTACTCAATT-CTTGAATGAAAGAATGTTTTTGTA 194002
| ||| ||| || | | | |||||||| ||||||| ||| | |||||| || | | |
Sbjct 1414067 AGAGATTGTGTTATTGCTTATGGTGCTTCTCAATTACTTTTA-GAAAGATTGATGATTTC 1414009
Query 194003 TTCTGATCCTTTTCAAGTCGATGTTTGCACAGAATGTGGTATGAT 194047
|||||| | ||| |||| ||| ||| | |||||||| ||||
Sbjct 1414008 ATCTGATGCCTTTGAAGTTGATACTTGTAACAAATGTGGTTTGAT 1413964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635177457085040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |