Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq12 145 1e-29 seq14 93.3 5e-14 >seq12 Length=1055690 Score = 145 bits (160), Expect = 1e-29 Identities = 210/297 (71%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 168581 AGGTGTTAAAGTTTGGAACGATAATGGTTCTCGTGAATTTTTAGATTTATGTGGTTTTAC 168640 ||| || ||| ||||| | | ||||||||||||| ||| |||||| ||| || || Sbjct 820168 AGGCGTCAAAATTTGGGATGGTAATGGTTCTCGTSAATACCTAGATTCTCTTGGGTTAAC 820227 Query 168641 CGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGC 168700 || ||| ||||||||||||||||||| ||||||| || |||||||||||| || || Sbjct 820228 TGACAGAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACATTTTGGTGC 820287 Query 168701 TCAATATATTGACTGTGATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAAAC 168760 | ||||| |||| ||| | || || ||||| ||||| || |||||||| | | Sbjct 820288 TGAATATGTTGATTGTCACACTGACTACACAAACAAAGGATACGATCAATTAAGCGATAT 820347 Query 168761 TATAAATACTTTACACAACAATCCGGAAAATAGAAGAATATTAATTAATAGTTGGGATGT 168820 || ||| || | | |||||| | |||||||||| | || | |||| || Sbjct 820348 AATTCATAAGTTGAAGACCAATCCTTACGATAGAAGAATCATCATGTCTGCTTGGAATCC 820407 Query 168821 ACCACAACTTGATAAAATGGTTCTTCCCCCTTGTCACACTTTAGTGCAATTTTATGT 168877 |||| | || | ||||||| |||||| || || ||| ||| ||||| ||||| Sbjct 820408 ACCAGACTTTAAGAAAATGGCTCTTCCGCCATGCCACGTTTTCTGTCAATTCTATGT 820464 Score = 93.3 bits (102), Expect = 5e-14 Identities = 185/268 (69%), Gaps = 7/268 (3%) Strand=Plus/Minus Query 192852 CAATCTGCTCGAAACTGTTTTTATACTTCTATGGTTAAACAAGCCATTGGATTTATTCCG 192911 |||||| || |||| || | | || |||||| ||| |||||||| || || | | Sbjct 610541 CAATCTCCTAGAAATACTTATCAATCTGCTATGGGTAAGCAAGCCATGGGTGTTTTCTTG 610482 Query 192912 TGTCAC---AACTTAAAAACGGAAACAGTATCTCATACATTAAATTATCCACAAAAACCC 192968 | || ||||| | || ||| || | || ||| || | || |||||||| || Sbjct 610481 ACTAACTATAACTTTAGAATGGATACCATGGCTAATATTTTGTACTACCCACAAAAGCCT 610422 Query 192969 CTTGTTACCAC-AGAT-ATTGCAAAATTTAATAAATTAGACGATTATCCAAATGGTATTA 193026 | | ||| || ||| | || || |||| | || | ||| |||| || |||| | Sbjct 610421 TTAGGTACTACCAGAGCAATGGAACATTTGA-AATTCAGA-GATTTACCTGCTGGTCAGA 610364 Query 193027 ATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGAAGACAGTATTATTTTAA 193086 |||||||||| ||||| || || ||| |||| |||||||||||||| || ||| | | Sbjct 610363 ATGCTATTGTAGCTATTGCATGTTATTCTGGATATAATCAAGAAGATTCCATGATTATGA 610304 Query 193087 ATAAAGCTTCTATTGAAAGAGGATTATT 193114 || || | |||||||| ||||| ||||| Sbjct 610303 ATCAATCATCTATTGATAGAGGTTTATT 610276 Score = 89.7 bits (98), Expect = 7e-13 Identities = 164/235 (70%), Gaps = 11/235 (5%) Strand=Plus/Plus Query 51830 AACACTTG-AAGTTGGAGACTTGGTTAAAAGACA-ATTGATGGATGGTGATGATGTACTA 51887 |||| ||| || |||| || | ||| ||||||| || || | |||||||| ||| || Sbjct 912366 AACAATTGCAAATTGGGGATATTGTTGAAAGACATATAGAAG-ATGGTGATATTGTTTTA 912424 Query 51888 TTAAATAGGCAACCAACACTTCATAAAGCTTCTATGCAAAGTTTTAAAGTTAAAATTCAA 51947 || ||||| || || | | |||| | ||||| | | | | ||||||| | Sbjct 912425 TTYAATAGACARCCTTCTTTGCATAGACTATCTATCTTATCCCATTATGCTAAAATTAGA 912484 Query 51948 CCAGTAAAAACATTTA----AAATGAATTTGGCTATGACTAAAGCATATAATGCTGATTT 52003 || | |||||| | ||| |||| || | || || | ||||||| |||||||| Sbjct 912485 CCTTGGAGAACATTCAGATTAAACGAATGTG--TTTG--TACACCATATAACGCTGATTT 912540 Query 52004 TGATGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGAA 52058 |||||| ||||||||||||||||||||||| ||| | | | ||||| || ||| Sbjct 912541 TGATGGTGATGAAATGAATTTACATGTTCCACAAACTGAAGAAGCTAGAGCCGAA 912595 >seq14 Length=1507144 Score = 93.3 bits (102), Expect = 5e-14 Identities = 159/225 (71%), Gaps = 8/225 (4%) Strand=Plus/Minus Query 193827 AAACATATGGTTAAGGATAAAATGCATGCTAG---AAGTCATGGACAAGTGACTACTTTA 193883 |||||||||||| |||||| |||||||| || ||| | | |||| | || ||| Sbjct 1414184 AAACATATGGTTTTGGATAAGATGCATGCAAGAGCAAG--AGGTCCAAGAG-CTGTCTTA 1414128 Query 193884 CATCGACAACCAAATTGTGGTCGTTCTCAAGGTGGAGGTTTAAGATTTGGAGAAATGGAG 193943 | ||||||| | ||| | ||| || ||| ||||| ||||| || |||||||| Sbjct 1414127 ACTAGACAACCTACGGAAGGTAGATCTAGAGATGGTGGTTTGAGATTAGGTGAAATGGAA 1414068 Query 193944 AAAGACTGTATTTTAGTTCATGGTGCTACTCAATT-CTTGAATGAAAGAATGTTTTTGTA 194002 | ||| ||| || | | | |||||||| ||||||| ||| | |||||| || | | | Sbjct 1414067 AGAGATTGTGTTATTGCTTATGGTGCTTCTCAATTACTTTTA-GAAAGATTGATGATTTC 1414009 Query 194003 TTCTGATCCTTTTCAAGTCGATGTTTGCACAGAATGTGGTATGAT 194047 |||||| | ||| |||| ||| ||| | |||||||| |||| Sbjct 1414008 ATCTGATGCCTTTGAAGTTGATACTTGTAACAAATGTGGTTTGAT 1413964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635177457085040