Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq12 152 6e-32
>seq12
Length=1055690
Score = 152 bits (168), Expect = 6e-32
Identities = 274/402 (68%), Gaps = 12/402 (3%)
Strand=Plus/Plus
Query 171666 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTAC 171725
||| || ||| ||||| ||| ||||||||||||| ||| |||||| ||||| ||
Sbjct 820168 AGGCGTCAAAATTTGGGATGGTAATGGTTCTCGTSAATACCTAGATTCTCTTGGGTTAAC 820227
Query 171726 TGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGC 171785
||| ||| ||||||||||||||||||| ||||||| || |||||||||||| || ||
Sbjct 820228 TGACAGAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACATTTTGGTGC 820287
Query 171786 TCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAAC 171845
| ||||| | || ||| | || || |||||| ||||| || |||||||| | |
Sbjct 820288 TGAATATGTTGATTGTCACACTGACTACACAAACAAAGGATACGATCAATTAAGCGATAT 820347
Query 171846 TATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGT 171905
||| ||| || | | ||| || | |||||| || | || | |||||||
Sbjct 820348 AATTCATAAGTTGAAGACCAATCCTTACGATAGAAGAATCATCATGTCTGCTTGGAATCC 820407
Query 171906 ACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCACACTTTAGCACAATTTTATGT--- 171962
||| | || | ||||||| |||||| || |||||| ||| ||||| |||||
Sbjct 820408 ACCAGACTTTAAGAAAATGGCTCTTCCGCCATGCCACGTTTTCTGTCAATTCTATGTTTC 820467
Query 171963 ----CAGaaaaaaaTCAATCTTAGATTGTCA-----GTTATATCAAAGATCAGCTGATTT 172013
| ||| | || | | ||||||| ||||| |||||||| |||| |
Sbjct 820468 TTTCCCTAAAGACCAAAAGCCTCAATTGTCATGTATCTTATACCAAAGATCTTGTGATAT 820527
Query 172014 AGGATTGGGGGTACCTTATAATATTGGATTTTATTCATTTTT 172055
|| ||||| || |||| || |||| | |||| | || ||
Sbjct 820528 GGGGTTGGGTGTTCCTTTCAACATTGCTTCTTATGCTTTGTT 820569
Score = 96.9 bits (106), Expect = 4e-15
Identities = 187/269 (70%), Gaps = 9/269 (3%)
Strand=Plus/Minus
Query 192405 CAATCTGCTCGAAACTGTTTTTATACTTCTATGGTTAAACAAGCCATTGGGTTTATTC-- 192462
|||||| || |||| || | | || |||||| ||| |||||||| |||| | |||
Sbjct 610541 CAATCTCCTAGAAATACTTATCAATCTGCTATGGGTAAGCAAGCCAT-GGGTGTTTTCTT 610483
Query 192463 --CTTGCCACAACTTAAAAACGGAAACAGTCTCTCATACATTAAATTATCCACAAAAACC 192520
|| | | ||||| | || ||| || | || ||| || | || |||||||| ||
Sbjct 610482 GACTAACTATAACTTTAGAATGGATACCATGGCTAATATTTTGTACTACCCACAAAAGCC 610423
Query 192521 ACTTGTTACCAC-AGAT-ATTGCAAAATTTAATAAATTAGACGATTATCCAAATGGTATT 192578
| | ||| || ||| | || || |||| | || | ||| |||| || ||||
Sbjct 610422 TTTAGGTACTACCAGAGCAATGGAACATTTGA-AATTCAGA-GATTTACCTGCTGGTCAG 610365
Query 192579 AATGCTATTGTTGCTATAGCTTGCTATACTGGCTATAACCAAGAAGACAGTATTATTTTA 192638
||||||||||| ||||| || || ||| |||| ||||| |||||||| || ||| |
Sbjct 610364 AATGCTATTGTAGCTATTGCATGTTATTCTGGATATAATCAAGAAGATTCCATGATTATG 610305
Query 192639 AATAAAGCTTCTATTGAAAGAGGATTATT 192667
||| || | |||||||| ||||| |||||
Sbjct 610304 AATCAATCATCTATTGATAGAGGTTTATT 610276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628531058580480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |