Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq12 152 6e-32 >seq12 Length=1055690 Score = 152 bits (168), Expect = 6e-32 Identities = 274/402 (68%), Gaps = 12/402 (3%) Strand=Plus/Plus Query 171666 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTAC 171725 ||| || ||| ||||| ||| ||||||||||||| ||| |||||| ||||| || Sbjct 820168 AGGCGTCAAAATTTGGGATGGTAATGGTTCTCGTSAATACCTAGATTCTCTTGGGTTAAC 820227 Query 171726 TGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGC 171785 ||| ||| ||||||||||||||||||| ||||||| || |||||||||||| || || Sbjct 820228 TGACAGAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACATTTTGGTGC 820287 Query 171786 TCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAAC 171845 | ||||| | || ||| | || || |||||| ||||| || |||||||| | | Sbjct 820288 TGAATATGTTGATTGTCACACTGACTACACAAACAAAGGATACGATCAATTAAGCGATAT 820347 Query 171846 TATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATGT 171905 ||| ||| || | | ||| || | |||||| || | || | ||||||| Sbjct 820348 AATTCATAAGTTGAAGACCAATCCTTACGATAGAAGAATCATCATGTCTGCTTGGAATCC 820407 Query 171906 ACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCACACTTTAGCACAATTTTATGT--- 171962 ||| | || | ||||||| |||||| || |||||| ||| ||||| ||||| Sbjct 820408 ACCAGACTTTAAGAAAATGGCTCTTCCGCCATGCCACGTTTTCTGTCAATTCTATGTTTC 820467 Query 171963 ----CAGaaaaaaaTCAATCTTAGATTGTCA-----GTTATATCAAAGATCAGCTGATTT 172013 | ||| | || | | ||||||| ||||| |||||||| |||| | Sbjct 820468 TTTCCCTAAAGACCAAAAGCCTCAATTGTCATGTATCTTATACCAAAGATCTTGTGATAT 820527 Query 172014 AGGATTGGGGGTACCTTATAATATTGGATTTTATTCATTTTT 172055 || ||||| || |||| || |||| | |||| | || || Sbjct 820528 GGGGTTGGGTGTTCCTTTCAACATTGCTTCTTATGCTTTGTT 820569 Score = 96.9 bits (106), Expect = 4e-15 Identities = 187/269 (70%), Gaps = 9/269 (3%) Strand=Plus/Minus Query 192405 CAATCTGCTCGAAACTGTTTTTATACTTCTATGGTTAAACAAGCCATTGGGTTTATTC-- 192462 |||||| || |||| || | | || |||||| ||| |||||||| |||| | ||| Sbjct 610541 CAATCTCCTAGAAATACTTATCAATCTGCTATGGGTAAGCAAGCCAT-GGGTGTTTTCTT 610483 Query 192463 --CTTGCCACAACTTAAAAACGGAAACAGTCTCTCATACATTAAATTATCCACAAAAACC 192520 || | | ||||| | || ||| || | || ||| || | || |||||||| || Sbjct 610482 GACTAACTATAACTTTAGAATGGATACCATGGCTAATATTTTGTACTACCCACAAAAGCC 610423 Query 192521 ACTTGTTACCAC-AGAT-ATTGCAAAATTTAATAAATTAGACGATTATCCAAATGGTATT 192578 | | ||| || ||| | || || |||| | || | ||| |||| || |||| Sbjct 610422 TTTAGGTACTACCAGAGCAATGGAACATTTGA-AATTCAGA-GATTTACCTGCTGGTCAG 610365 Query 192579 AATGCTATTGTTGCTATAGCTTGCTATACTGGCTATAACCAAGAAGACAGTATTATTTTA 192638 ||||||||||| ||||| || || ||| |||| ||||| |||||||| || ||| | Sbjct 610364 AATGCTATTGTAGCTATTGCATGTTATTCTGGATATAATCAAGAAGATTCCATGATTATG 610305 Query 192639 AATAAAGCTTCTATTGAAAGAGGATTATT 192667 ||| || | |||||||| ||||| ||||| Sbjct 610304 AATCAATCATCTATTGATAGAGGTTTATT 610276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628531058580480