Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq15 215 1e-50
seq18 170 4e-37
seq16 165 2e-35
seq12 100 6e-16
>seq15
Length=137011
Score = 215 bits (238), Expect = 1e-50
Identities = 179/219 (82%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| |||||||| | ||||||||||| |||||||||||||| || || || ||||||||
Sbjct 38887 ACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGA 38946
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| ||||||||||||||| |||||| ||||||||||||| |||||||||||| || ||
Sbjct 38947 TAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 39006
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| |||||||| ||||| ||||| || || ||| ||||| || ||| || ||| ||
Sbjct 39007 AATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGAC 39066
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
||||||||| || ||||| || || || ||||| |||||
Sbjct 39067 TTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAA 39105
>seq18
Length=436904
Score = 170 bits (188), Expect = 4e-37
Identities = 175/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| ||||| || | | |||||||| | ||| |||||||| || || || || |||||
Sbjct 25615 ACCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 25556
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| | ||||||| ||||||| ||| || ||||| ||||||| |||||||||||| || ||
Sbjct 25555 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGG 25496
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| ||||| || ||||| || || || || ||||| || || | |||| || ||| ||
Sbjct 25495 AATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGAC 25436
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
|||||||| || ||||| || || | || ||||| || || ||||||
Sbjct 25435 CTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATT 25387
>seq16
Length=726111
Score = 165 bits (182), Expect = 2e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| ||||| || | | |||| || ||||| |||||||| || || || ||||||||
Sbjct 202567 ACCACCTCTTAATCTTAAGACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGA 202508
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
|| ||||||| ||||||| |||||| || || || || | |||||||||||| |||||
Sbjct 202507 TAATGTTCTACCATCTTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAGG 202448
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| |||||||||||||| || || | ||| ||| || || | ||| ||| ||| ||
Sbjct 202447 AATACCTTCCTTATCTTGGATTTTAGATTTGACAGCGTCGATAGAGTCACTAGATTCAAC 202388
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811
||| ||||| || ||||| || || || || || ||||| || ||||||
Sbjct 202387 TTCTAAAGTGATGGTCTTACCAGTTAAAGTTTTAACAAAGATTTGCATT 202339
>seq12
Length=1055690
Score = 100 bits (110), Expect = 6e-16
Identities = 134/184 (73%), Gaps = 3/184 (2%)
Strand=Plus/Minus
Query 143985 GATCCAGTCTTGCATATAGAACTTAGGAGATGGGCTGATGTTTTTATTATAGCGCCCTTA 144044
|||||| ||||| | |||||||| |||||||||||||| ||| |||| ||||| ||
Sbjct 1012289 GATCCAACTTTGCAAGTTGAACTTAGAAGATGGGCTGATGTATTTGTTATYGCGCCATTG 1012230
Query 144045 ACAGCAAATACGTTAGCAAAAATAGCCAATGGTATATGCGATAATTTACTAACATCTATA 144104
| |||||||| ||||| ||||| ||||||||||| || ||| || | || |||
Sbjct 1012229 AGTGCAAATACCTTAGCCAAAATTAGCAATGGTATATCTGACAATCTATTGACTAACATA 1012170
Query 144105 GTAAGAGCCTGG-GATATAAATAAACCTCTTATTTTTTG--CCCCGCTATGAATACCCTT 144161
|| |||| |||| | | | ||| ||| | |||| || ||||||||||| ||
Sbjct 1012169 GTCAGAGGCTGGCCAGTCACCTCAACTCCTTTGTATTTGGCACCTGCTATGAATACTTTT 1012110
Query 144162 ATGT 144165
||||
Sbjct 1012109 ATGT 1012106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981826973566102
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |