Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq14 242 9e-59
seq1 174 4e-38
seq6 123 6e-23
seq12 89.7 1e-12
>seq14
Length=1507144
Score = 242 bits (268), Expect = 9e-59
Identities = 580/870 (67%), Gaps = 21/870 (2%)
Strand=Plus/Minus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
|||||||||||||||| || | ||| | | || ||| | ||||||| |||||
Sbjct 782032 ACTATTTTGGTTTCAAGACATTGGAAAGATCATACTTATTGAAGATCAATGGTAAGATCG 781973
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421
||||| | || ||||| || | | | ||||| ||||||| || || | | |||
Sbjct 781972 TTGAAAGACCACAACATTTGATYATGAGAGTTGCTGTTGGTATCCACGGTGAAAACATTG 781913
Query 110422 AAGCTGTTATTGAATGTTA-----TGATGTATTAAGTAAAAAGAAAGCT-ATTCATGCTA 110475
|| || || ||| ||| |||||| | || ||| | | | ||||||
Sbjct 781912 AAAAAGTCATCGAAACTTACAACTTGATGTCTCAA------AGATACTTTACCCATGCTT 781859
Query 110476 CTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TA 110534
|||| || ||||| || || || ||| || ||| || ||||||| |||||| |
Sbjct 781858 CTCCAACACTATTCAATGCTGGTACTCCAAGACCTCAAATGTCTTCTTG-TTTCTTAATT 781800
Query 110535 GGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA-GAAACTGCTCTTAT 110593
|| || |||||||||||||| ||||| |||||| | ||| || ||| ||||| ||
Sbjct 781799 TCTATGAAGGATGATTCTATTGACGGTATCTATGATAC-CTTRAAGGAATGTGCTCAAAT 781741
Query 110594 TTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAA 110653
|||||| | | || || |||||| | ||| |||| | || | || | || | |
Sbjct 781740 TTCTAAGACTGCMGGTGGTATTGGTTTACACATTCACAACATCAGATCCACTGGCTCTTA 781681
Query 110654 TATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGA 110713
|| || | || ||| |||| | ||| | |||| ||| | ||||| |||||| |
Sbjct 781680 CATTGCTGGTACCAATGGTACTTCCAATGGTTTGATTCCTATGGTTAGAGTTTTCAACAA 781621
Query 110714 CACTGCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCT 110770
|||||| | |||||| ||||||||||| || ||| ||| | |||||| | || ||
Sbjct 781620 CACTGCCAGATATGTTGATCAAGGTGGTAACAAAAGACCTGGTGCCTTTGCTCTGTACCT 781561
Query 110771 CGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGA 110830
||||| ||||| || ||||| ||||| ||| | || | | |||||||| || ||
Sbjct 781560 AGAACCATGGCACTCTGATATCTTTGATTTCATCGACATCAGAAAAAATCACGGTAAGGA 781501
Query 110831 AGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACG 110890
|||| ||||| | |||||||| || | |||||| | || || |||||||| |
Sbjct 781500 AGAAATCAGAGCTAGAGATTTATTCCCAGCTTTATGGATTCCTGACTTGTTCATGAAGAG 781441
Query 110891 TGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGA 110950
|| | | |||||| ||| || | | | |||| | |||||||| | ||
Sbjct 781440 AGTCAAGGCAAATGGTGATTGGACTTTATTCTCTCCTAGTGAAGCTCCTGGTTTGAGYGA 781381
Query 110951 TGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCG 111010
|| ||||| | || |||||| | || || || |||| ||| |||||| | | |
Sbjct 781380 TGCTTATGGTGATGACTTTGAAAAGCTWTATGACCAATACGAACTAGAAGGTAGAGGTAG 781321
Query 111011 CAAACAAATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTG 111069
||| | || | |||||| | | |||| | ||| | ||| | ||| |||||||
Sbjct 781320 -AAAGACCATCAAGGCTCAAAAGTTATGGTACGCCATCTTAGAAGCCCAAACCGAAACTG 781262
Query 111070 GAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAG 111129
| ||||||| ||| | || || ||| | |||| ||||||||||||| ||| || |
Sbjct 781261 GTACTCCTTTCATTGTTTACAAGGATGCTTGTAATAAAAAATCTAATCAAAAGAACTTGG 781202
Query 111130 GAACAATTAAGTCTAGTAATTTGTGCTGTG 111159
| |||||||| ||| ||| || || ||||
Sbjct 781201 GTACAATTAAATCTTCTAACTTATGTTGTG 781172
Score = 100 bits (110), Expect = 7e-16
Identities = 115/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389
||||| |||||||| ||||| || || ||||||||||| |||||||| || | ||| ||
Sbjct 982471 GTTCTTTTCAATAGACAACCTTCTCTACATAAAATGTCCATGATGGCACACAGAGTAAAG 982530
Query 305390 GTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGAT 305449
|| | || | || || |||| ||| | || | | | ||||||||||| |||
Sbjct 982531 GTCATGCCTTATTCCACCTTCAGATTGAATCTGTCTGTTACTTCTCCTTATAATGCTGAT 982590
Query 305450 TTTGATGGAGATGAAATGAATATGCATGTACCTCA 305484
|| ||||| || ||||||||| | ||||| |||||
Sbjct 982591 TTCGATGGTGACGAAATGAATTTACATGTCCCTCA 982625
>seq1
Length=1289090
Score = 174 bits (192), Expect = 4e-38
Identities = 484/731 (66%), Gaps = 31/731 (4%)
Strand=Plus/Plus
Query 131468 TATAAGAAATCTGTTGCGGCCTTCTGGACTGTTGAAGAGATCGATATGACCAAAGATATT 131527
||||||| | | | || | |||||||| | |||||| |||||| || | || ||| |
Sbjct 687702 TATAAGAGAGCCGAAGCTTCTTTCTGGACCGCTGAAGAAATCGATTTGTCTAAGGATTTA 687761
Query 131528 GATGATTGGGAAAAATTAACCTTGAATGAAAA----AGATTTTG--TTTCCAAAGTTCTT 131581
| |||||| | || || |||||||||| ||||||| |||| | ||| |
Sbjct 687762 CACGATTGGAATAACAGAA---TGAATGAAAATGAAAGATTTTTCATTTCAAGAGTMTTG 687818
Query 131582 GCATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTGTTATTAATTTCATTCAA 131641
|| ||||| || | |||||| ||||| | |||||| | ||| || ||| |
Sbjct 687819 GCTTTCTTTGCTGCTTCTGATGGTATTGTCAATGAAAACTTGGTTGAAAAYTTCTCTGCT 687878
Query 131642 GAAATTGATATTCCTGAAGTAACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATT 131701
||| || | ||||| |||| | | |||||| || ||| | ||| |||
Sbjct 687879 GAAGTTCAAATTCCAGAAGCTAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATT 687938
Query 131702 CATAGCGAGATGTATTCATTATTGATTGAGAGTCTTG--TTAAAAATGAAGATGATAAAA 131759
|| || | ||||| ||||| ||| ||| | | | || || | | || ||
Sbjct 687939 CACTCTGAAACTTATTCTTTATT-ATT-AGACACATACATCAAGGATCCAAAGGAAAATG 687996
Query 131760 ATAAATTATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTA 131819
|| ||||| | ||| || | | |||||| |||||| | || || ||||||||||
Sbjct 687997 ATTTCTTATTAAACGCTATAGAAACTATTCCTGAAATTAAGGAAAAGGCTGAATGGGCTA 688056
Query 131820 TTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTG 131879
||| ||||||||||||| | |||| ||| || |||||| || ||||||||| ||
Sbjct 688057 TTAGATGGATTCAAGATAAGGACGCTTTGTTTGCTGAAAGACTGGTTGCTTTTGCTGCTG 688116
Query 131880 TTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGAT 131939
|||||||| | || || || ||| | || ||||||||| ||| | ||||| || |
Sbjct 688117 TTGAAGGTGTCTTTTTCTCTGGTTCATTTGCTGCTATCTTCTGGTTGAAGAAAAAGGGTT 688176
Query 131940 TGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTG 131999
|||||||||| | | || ||||| |||| |||| |||||||||| || |||||||
Sbjct 688177 TGATGCCTGGTTTGACTTTCTCCAACGAATTGATCTGTAGAGATGAAGGTTTACATACTG 688236
Query 132000 AATTTGC---TATATTAATCTATAGAAAATTTGCTGATAAACTTGATGAAAATAATATTA 132056
| ||||| | |||| ||| | || | || | ||| ||| | |||
Sbjct 688237 ACTTTGCCTGTCTATTGTTCTCY---CACTTAAAGAACAAGCCAGATCCAAAGATCATTG 688293
Query 132057 AACAACTTATAAGCGAAGCAGTTGATATCGAGAAG---GAGTTTATTACAGAAGCTTTGC 132113
|| | |||| ||||| ||||| || || ||| | ||| || || || | |
Sbjct 688294 AAAGAATTATTGCTGAAGCTGTTGAAATTGAAAAGAGATACTTTGTT---GATGCCATTC 688350
Query 132114 C--TTGCAATTTGATTGGGATGAATGCTGACTCT-ATGAAGGAGTACATTGAATTCGTTG 132170
| ||||| || |||| ||||||||||| ||| ||||| | || ||||||| ||||
Sbjct 688351 CAGTTGCA--TTACTTGGTATGAATGCTGA-TCTAATGAACCAATATGTTGAATTTGTTG 688407
Query 132171 CTGATCGTTTA 132181
||||| | |||
Sbjct 688408 CTGATAGATTA 688418
>seq6
Length=996468
Score = 123 bits (136), Expect = 6e-23
Identities = 207/303 (68%), Gaps = 3/303 (1%)
Strand=Plus/Plus
Query 167627 CATAGTGTCAAAAACATCGATGAAACTTTTCCAGATTTTTATCGAACCACGTCGTTTGCA 167686
||| || | |||| ||| |||||| |||||| || ||| || ||||| ||| ||
Sbjct 454316 CATGGTATTAAAAGTATCAATGAAATATTTCCAAGTTCTTACATTACAACGTCTTTTACA 454375
Query 167687 TTCATCGTAAAAACCATAGTCTCTTGAGATATCAGCACATTCGTGATTTCCTCTTAATAA 167746
||||| ||||| ||||| |||| | || | |||||||||||||| |||||||||||
Sbjct 454376 CTCATCATAAAATCCATATACTCTAGTGACACTGGCACATTCGTGATTACCTCTTAATAA 454435
Query 167747 AATTATGTTATTTNNNNNNNNNNNNNTGTAGCAAAATAATAACAAAATTGTTTCTAATGA 167806
|| | ||| | | ||||||| || || | ||| |||||||| || ||
Sbjct 454436 AAAGAAGTTTTCTGGATACTTGATCTTGTAGCATAACAAAAGCAATATTGTTTCCAAAGA 454495
Query 167807 TTTAACACCTCTATCAACATAATCACCTAAAAATATATATTTATTTTGGTTTGAAGGATT 167866
|| ||||||||| ||||||||||||| |||| | | ||| | | |||
Sbjct 454496 TTGTTTACCTCTATCGACATAATCACCTAGGAATA---AGTAATTGGACGTAGGGGGAAA 454552
Query 167867 ATCTAGTTTTTTAAAAATATTCAATAAATCACTAAATTGACCATGTAAATCACCTACAAC 167926
| | ||||| ||| || | | |||||| ||||| ||||| | |||||| ||||
Sbjct 454553 ACCACATTTTTCAAACATTCTGATCAAATCATGGAATTGTCCATGAACATCACCAACAAT 454612
Query 167927 CTT 167929
|||
Sbjct 454613 CTT 454615
>seq12
Length=1055690
Score = 89.7 bits (98), Expect = 1e-12
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 305286 AAATTAATGATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGC 305345
||||| ||||||||| |||||| | | || |||| ||| | || ||||| |
Sbjct 912375 AAATTGGGGATATTGTTGAAAGACATATAGAAGATGGTGATATTGTTTTATTYAATAGAC 912434
Query 305346 AACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGA 305405
| || || |||||| | | ||||| | | ||| | | ||| | | || | |
Sbjct 912435 ARCCTTCTTTGCATAGACTATCTATCTTATCCCATTATGCTAAAATTAGACCTTGGAGAA 912494
Query 305406 CATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAA 305465
|||| ||||||| | | ||| |||||| || ||||| || ||||||||||| |||||||
Sbjct 912495 CATTCAGATTAAACGAATGTGTTTGTACACCATATAACGCTGATTTTGATGGTGATGAAA 912554
Query 305466 TGAATATGCATGTACCTCAA 305485
||||| | ||||| || |||
Sbjct 912555 TGAATTTACATGTTCCACAA 912574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812526291298
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |