Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq16 129 4e-25 seq15 89.7 3e-13 seq18 87.8 1e-12 >seq16 Length=726111 Score = 129 bits (142), Expect = 4e-25 Identities = 178/245 (73%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| || | ||| || | ||| |||||| |||||||| ||||||||||| || Sbjct 202567 ACCACCTCTTAATCTTAAGACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGA 202508 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| | | || || |||||||| ||||| |||||||| | || ||||| | || Sbjct 202507 TAATGTTCTACCATCTTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAGG 202448 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| || || ||||| | || ||| ||| | | ||| || ||||| | Sbjct 202447 AATACCTTCCTTATCTTGGATTTT-AGATTTGACAGCGTCGATAGAGTCACTAGATTCAA 202389 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTGTGT 33760 | || | ||||| || ||||| ||||| ||||| |||||||| ||||| || | | ||| Sbjct 202388 CTTCTAAAGTGATGGTCTTACCAGTTAAAGTTTTAACAAAGATTTGCATTGTGGATATGT 202329 Query 33761 -TTAT 33764 |||| Sbjct 202328 GTTAT 202324 >seq15 Length=137011 Score = 89.7 bits (98), Expect = 3e-13 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | || || || |||||||| |||||||| ||||||||||| | Sbjct 38886 CACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAG 38945 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | |||| || |||||||| || ||||| || || | || ||||| | | Sbjct 38946 ATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTG 39005 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||| ||||| || || | | ||| ||| | || || ||||| Sbjct 39006 GAATACCTTCCTTGTCTTGGATCTT-GGCCTTGACAGCGTCAATAGTTTCAGCAGATTCG 39064 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740 || || | ||||| || ||||| ||||| || || ||||| Sbjct 39065 ACTTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAA 39105 >seq18 Length=436904 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||||||||| || | ||| || || |||| |||| |||||||| |||||||| || | Sbjct 25616 CACCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAG 25557 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | | || || ||||| || || || || || || | || ||||| | | Sbjct 25556 ATAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTG 25497 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||||||||| ||||| | | ||||| ||| | | || ||||| Sbjct 25496 GAATACCTTCTTTGTCTTGGATTTT-AGCCTTAACATTGTCGATAGAATCAGAAGATTCG 25438 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || || ||||| |||| |||||||| || || ||||| Sbjct 25437 ACCTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCAT 25388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703927890560