Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq15 105 2e-17
seq14 87.8 4e-12
>seq15
Length=137011
Score = 105 bits (116), Expect = 2e-17
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || | || || || || |||||||||||||| ||| | |||| || |
Sbjct 39106 TTTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTAT 39047
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| | || ||| ||||| ||||| || ||||| ||| || || |||||| |
Sbjct 39046 TGACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATT 38987
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
||||| || || || || || ||||| || || || || | ||||||||| |||| ||
Sbjct 38986 AATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAA 38927
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||| |||||||| ||| | ||| | |||
Sbjct 38926 AGAATCTACTCTACACTTAGTTCTAAGA 38899
>seq14
Length=1507144
Score = 87.8 bits (96), Expect = 4e-12
Identities = 161/234 (69%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 173107 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 173166
|| |||||||| || ||||| || ||||| || | ||| || | || ||| || |
Sbjct 781234 GCATCCTTGTAAACAATGAAAGGAGTACCAGTTTCGGTTTGGGCTTCTAAGATGGCGTAC 781293
Query 173167 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 173226
|| | | ||| || || | ||| |||| |||| |||||| ||||||| |||||
Sbjct 781294 CATAACTTTTGAGCCTTGATGGTCTTTCTACCTCTACCTTCTAGTTCGTATTGGTCATAW 781353
Query 173227 AGGTCTTCGAAATCCTTCCCGTAAATTTCG-TCAAGACCGGGAGCTTCCTTCGGACAAAA 173285
|| | ||| || || | || ||| || |||| ||| |||||||| | ||| | ||
Sbjct 781354 AGCTTTTCAAAGTCATCACCATAAGCATCRCTCAA-ACCAGGAGCTTCACTAGGAGAGAA 781412
Query 173286 GAGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCA 173339
| | |||||| |||| | || ||| ||||||||||| | ||| | | ||||
Sbjct 781413 TAAAGTCCAATCACCATTTGCCTTGACTCTCTTCATGAACAAGTCAGGAATCCA 781466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820527442578
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |