Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq16 140 3e-28 seq18 122 8e-23 seq15 91.5 1e-13 >seq16 Length=726111 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| ||||| || || | ||||| | ||||| ||| | | Sbjct 202340 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTAGT 202399 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||||| || ||| ||||| ||||| || ||||| || || ||||| Sbjct 202400 GACTCTATCGACGCTGTCAAATCTAAAATCCAAGATAAGGAAGGTATTCCTCCTGATCAA 202459 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 |||||| | |||| || ||| |||||| | ||||||| ||||| | |||||||| Sbjct 202460 CAAAGATTGATTTTCGCCGGTAAACAATTAGAAGATGGTAGAACATTATCTGATTACAAC 202519 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||||||||||||||| | ||| |||| |||||||| ||||| || Sbjct 202520 ATTCAAAAAGAATCCACTCTCCATCTAGTCTTAAGATTAAGAGGTGG 202566 >seq18 Length=436904 Score = 122 bits (134), Expect = 8e-23 Identities = 166/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 25170 ACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAG 25229 |||| |||||| | || |||||||| |||| || || | || || | || |||||| Sbjct 25383 ACAAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAAT 25442 Query 25230 CCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289 | ||| ||||||| | || || ||||| || ||||| ||||| || || | Sbjct 25443 CTTCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTG 25502 Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATT 25349 |||| |||||| | || | || || || ||| | ||||||| ||||| | | || | Sbjct 25503 ATCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACT 25562 Query 25350 ACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||| ||||||||||||||||| | || ||||| |||||||| ||||| || Sbjct 25563 ACAACATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATTAAGAGGTGG 25614 >seq15 Length=137011 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 25184 TTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATC 25243 ||||| || || |||||||| || | ||||| | ||||||||| | || ||||| Sbjct 39105 TTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTATT 39046 Query 25244 GAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTC 25303 || || || || || || || || ||||| || || ||||| |||||| | Sbjct 39045 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 38986 Query 25304 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAA 25363 || | | || |||||| | ||||| | ||||| | |||||||| || |||||| Sbjct 38985 ATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAA 38926 Query 25364 GAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| || | || ||||| ||||||||||||| || Sbjct 38925 GAATCTACTCTACACTTAGTTCTAAGATTGAGAGGTGG 38888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445094299853760