Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq16 132 5e-26
seq18 125 7e-24
seq15 98.7 1e-15
>seq16
Length=726111
Score = 132 bits (146), Expect = 5e-26
Identities = 170/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || || || || || || |||||||| |||||||||||||| || |
Sbjct 202566 CCACCTCTTAATCTTAAGACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGAT 202507
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||||| || || |||||||| | || ||||| || ||
Sbjct 202506 AATGTTCTACCA-TCTTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAGG 202448
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || ||||| ||||| |||||| ||||| | | ||| ||||| ||
Sbjct 202447 AATACCTTCCTTATCTTGGATTTTAGATTTGACAGCGTCGATAGAGTCACTAGATTCAAC 202388
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| | ||| ||||| ||||| |||||||||||||| || ||||||||| ||
Sbjct 202387 TTCTAAAGTGATGGTCTTACCAGTTAAAGTTTTAACAAAGATTTGCATTGTG 202336
>seq18
Length=436904
Score = 125 bits (138), Expect = 7e-24
Identities = 169/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || || || | ||||| |||||||| ||||||||||||||||| |
Sbjct 25614 CCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAT 25555
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | || || || || || || || | || ||||| || ||
Sbjct 25554 AAAGTTCTACCA-TCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGG 25496
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| |||||||| ||||| ||||| || || ||| | | || || ||||| ||
Sbjct 25495 AATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGAC 25436
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGT 134718
|| | ||||||||| ||||| |||| |||||| |||||||||||||||||||
Sbjct 25435 CTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTTGT 25383
>seq15
Length=137011
Score = 98.7 bits (108), Expect = 1e-15
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| ||||| | || | || | |||||| || ||||| ||||| |||||||| ||
Sbjct 38888 CCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGAT 38947
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || | ||||| || ||||| || || | || ||||| || ||
Sbjct 38948 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGA 39007
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| ||||| || ||||| || || ||||| ||||| | || || | ||||| ||
Sbjct 39008 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGACT 39067
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705
|| | ||| ||||| ||||||||||| || || || |||
Sbjct 39068 TCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAAA 39106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398286285360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |