Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1 187 2e-42 seq17 158 1e-33 seq12 122 7e-23 >seq1 Length=1289090 Score = 187 bits (206), Expect = 2e-42 Identities = 426/633 (67%), Gaps = 10/633 (2%) Strand=Plus/Plus Query 43655 AGCTTAAAAATGGCGAATGTTTTGCTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCA 43714 |||| ||||| | |||| ||||| | |||||||| || || || | || ||| Sbjct 687617 AGCTGAAAAA-GACGAA-GTTTTATTAACAGAAAACAAAAGAAGATTCGTTTTATTCCCA 687674 Query 43715 ATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCA 43774 || ||| | || || ||| || || || | ||| | || || || ||||| || Sbjct 687675 ATCAAATTCCCAGAAATTTGGGAAGCCTATAAGAGAGCCGAAGCTTCTTTCTGGACCGCT 687734 Query 43775 GAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGCATTAA--AACCACAA-GA 43830 |||||| | |||||| |||| || ||| ||| |||||| | || || | || || Sbjct 687735 GAAGAAATCGATTTGTCTAAGGATTTA-CACGATTGGAATAACAGAATGAATGAAAATGA 687793 Query 43831 AAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGA 43890 || | ||| || || || ||||| || |||||||| || || || |||||||| Sbjct 687794 AAGATTTTTCATTTCAAGAGTMTTGGCTTTCTTTGCTGCTTCTGATGGTATTGTCAATGA 687853 Query 43891 AAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGG 43950 ||| |||||| || | ||||||||| | |||||||| ||||| || || Sbjct 687854 AAACTTGGTTGAAAAYTTCTCTGCTGAAGTTCAAATTCCAGAAGCTAAGTGTTTCTACGG 687913 Query 43951 GTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTA 44010 || |||||| || ||||| ||||| || |||| || | | | |||| || || Sbjct 687914 TTTCCAAATTATGATGGAAAACATTCACTCTGAAACTTATTCTTTATTATTAGACACATA 687973 Query 44011 CATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGAT 44070 |||||| ||| | || || || || || || || |||||||| | |||| || Sbjct 687974 CATCAAGGATCCAAAGGAAAATGATTTCTTATTAAACGCTATAGAAACTATTCCTGAAAT 688033 Query 44071 TAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTT---TGGAGA 44127 ||| | || || || ||||| ||| |||||| | || || |||| || || Sbjct 688034 TAAGGAAAAGGCTGAATGGGCTATTAGATGGATTCAAGATAAGGACGCTTTGTTTGCTGA 688093 Query 44128 ACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCAT 44187 | |||| || || ||||| | ||| ||||| | || || || || || ||||| || || Sbjct 688094 AAGACTGGTTGCTTTTGCTGCTGTTGAAGGTGTCTTTTTCTCTGGTTCATTTGCTGCTAT 688153 Query 44188 ATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAG 44247 || ||||| |||||| |||||||||||||| ||||| || || || || || || | Sbjct 688154 CTTCTGGTTGAAGAAAAAGGGTTTGATGCCTGGTTTGACTTTCTCCAACGAATTGATCTG 688213 Query 44248 TCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280 | | |||||||| |||||| || ||||| || Sbjct 688214 TAGAGATGAAGGTTTACATACTGACTTTGCCTG 688246 >seq17 Length=230754 Score = 158 bits (174), Expect = 1e-33 Identities = 333/494 (67%), Gaps = 16/494 (3%) Strand=Plus/Minus Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407 || ||||| || || || || || ||| || || || || ||||||||| || || || Sbjct 69001 GGTCTTTTACTATACGGTCCTCCAGGTACAGGTAAGACTTTGATTGCGAGAAAAATTGGT 68942 Query 19408 AAATTACTTA---CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAA 19464 || | | | ||||| ||||| || ||||| |||||||||||||| || | ||| Sbjct 68941 AATATGTTGAATGCAAAAGAACCT---AAGATTGTTAATGGTCCTGAAATATTGAGTAAG 68885 Query 19465 TATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAA 19524 ||||| ||| || |||||||| | || |||||| || ||||| ||||| | Sbjct 68884 TATGTTGGTTCTTCTGAAGAAAACATTAGAAATTTGTTCAAGGATGCTGAGCAAGAATAT 68825 Query 19525 AAACGTTTAGGGCGCAAAAGT--TCTTTGCACATTATAATACTAGATGAATTGGACGCAA 19582 || || || | || | | ||||| |||||||| || | ||||||||||| | Sbjct 68824 AA--GTCTAAAGGTGAAGAATCATCTTTACACATTATTATCTTTGATGAATTGGATTCTG 68767 Query 19583 TCTGTAAGCAAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATC 19636 | | || ||||||||||| || || | || ||| ||| | |||||| || | Sbjct 68766 TTTTCAAACAAAGAGGTTCAAGAGGTGATGGTACAGGTGTAGGTGATAATGTTGTTAACC 68707 Query 19637 AACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGA 19696 | | | | || | || |||||| | ||| | ||||||||||| |||||||| |||| Sbjct 68706 AGTTGTTAGCCAAGATGGATGGTGTTGATCAATTAAATAATATTTTGGTTATTGGTATGA 68647 Query 19697 CTAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGA 19756 | |||||| || | ||||| | ||| | || |||| ||| | || ||| | | Sbjct 68646 CAAATAGAAGAGATCTTATAGATAACGCTCTTTTGAGACCAGGTAGATTTGAAGTTCAAG 68587 Query 19757 TCGAAATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAA 19816 | ||||| || |||| |||||| ||| | || |||||||| | || || ||| || Sbjct 68586 TTGAAATCAAGCTACCTGATGAAGCTGGTAGATTGCAAATTTTAGAAATTCAAACAAAAA 68527 Query 19817 CCATGCGACAAAAT 19830 ||| || | ||| Sbjct 68526 AAATGAGAGATAAT 68513 >seq12 Length=1055690 Score = 122 bits (134), Expect = 7e-23 Identities = 444/689 (64%), Gaps = 39/689 (6%) Strand=Plus/Plus Query 40692 TTTCCGTTGCTAACTACaaaaaaaaTGTTTTGGAAAGGCATTGCAGAAGAACTGTTATGG 40751 ||||| || |||| ||||| | | | ||| |||| ||| | |||||| | ||| Sbjct 820067 TTTCCTTTATTAACAACAAARAGAGTATTTACCAAAGCTATTATATTAGAACTTCTTTGG 820126 Query 40752 TTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGA-GGAGTGCACATTTGGAA 40810 ||| | || || ||| ||| || || || || ||||| || || | |||||| | Sbjct 820127 TTTGTTAAGGGAGATACCAATAACAAAAATCTA-CAAAAAGAAGGCGTCAAAATTTGGGA 820185 Query 40811 TGCGCACAGTTCT----AAAACATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAG 40866 || | ||||| || || || | ||| | || ||| || || || |||| Sbjct 820186 TGGTAATGGTTCTCGTSAATACCTAGAT-TCTC---TTGGGTTAACTGACAGAGAAGAAG 820241 Query 40867 GTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTA 40926 ||||| | |||||||||||||| || || | | |||||||||| || |||||| | Sbjct 820242 GTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAATATGTTGAT- 820300 Query 40927 TGT-ACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAG---ATACG 40982 ||| || |||| || || || |||||| ||||||||| ||| |||| ||| | Sbjct 820301 TGTCACACTGACTACACAAACAAAGGATACGATCAATTAA---GCGATATAATTCATAAG 820357 Query 40983 ATTAAATCCGATCC---CGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGAC 41039 | || || |||| |||||| || || || ||| || ||||| ||| | ||| Sbjct 820358 TTGAAGACCAATCCTTACGATAGAAGA---ATCATCATGTCTGCTTGGAATCCACCAGAC 820414 Query 41040 GTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTG------- 41092 | | ||||| | || || || || | || ||||| || || |||| Sbjct 820415 TTTAAGAAAATGGCTCTTCCGCCATGCCACGTTTTCTGTCAATTCTATGTTTCTTTCCCT 820474 Query 41093 ------CAATGG--TGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTA 41144 ||| | | || |||||||| || || |||||||| |||| ||||| | Sbjct 820475 AAAGACCAAAAGCCTCAATTGTCATGTATCTTATACCAAAGATCTTGTGATATGGGGTTG 820534 Query 41145 GGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACC 41204 || || || || ||||| || ||||||| || | || ||||||||| | ||| Sbjct 820535 GGTGTTCCTTTCAACATTGCTTCTTATGCTTTGTTGACCAGAATGATTGCAAAGGTTGTT 820594 Query 41205 AATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCAC 41264 || | | |||||||||| ||||||| | || |||| || |||||| | || Sbjct 820595 GATATGGATTGTGGTGAATTTATTCACACCATGGGTGATGCTCACGTTTACAAGGAYCAT 820654 Query 41265 ATAGAGCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATT 41324 |||| | || | ||||||| | | ||| || ||| ||| || || || || Sbjct 820655 GTAGATGCTTTRAAAGAACAAMTTGAAAGAACTCCAAGAGAATTCCCTACTTTAGAAATA 820714 Query 41325 AAACGCGCTGTTGAAAACATTGATGATTT 41353 ||| | | | || || ||||||||||||| Sbjct 820715 AAAAGAGATATTAAAGACATTGATGATTT 820743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455912808090