Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1 187 2e-42
seq17 158 1e-33
seq12 122 7e-23
>seq1
Length=1289090
Score = 187 bits (206), Expect = 2e-42
Identities = 426/633 (67%), Gaps = 10/633 (2%)
Strand=Plus/Plus
Query 43655 AGCTTAAAAATGGCGAATGTTTTGCTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCA 43714
|||| ||||| | |||| ||||| | |||||||| || || || | || |||
Sbjct 687617 AGCTGAAAAA-GACGAA-GTTTTATTAACAGAAAACAAAAGAAGATTCGTTTTATTCCCA 687674
Query 43715 ATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCA 43774
|| ||| | || || ||| || || || | ||| | || || || ||||| ||
Sbjct 687675 ATCAAATTCCCAGAAATTTGGGAAGCCTATAAGAGAGCCGAAGCTTCTTTCTGGACCGCT 687734
Query 43775 GAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGCATTAA--AACCACAA-GA 43830
|||||| | |||||| |||| || ||| ||| |||||| | || || | || ||
Sbjct 687735 GAAGAAATCGATTTGTCTAAGGATTTA-CACGATTGGAATAACAGAATGAATGAAAATGA 687793
Query 43831 AAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGA 43890
|| | ||| || || || ||||| || |||||||| || || || ||||||||
Sbjct 687794 AAGATTTTTCATTTCAAGAGTMTTGGCTTTCTTTGCTGCTTCTGATGGTATTGTCAATGA 687853
Query 43891 AAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGG 43950
||| |||||| || | ||||||||| | |||||||| ||||| || ||
Sbjct 687854 AAACTTGGTTGAAAAYTTCTCTGCTGAAGTTCAAATTCCAGAAGCTAAGTGTTTCTACGG 687913
Query 43951 GTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTA 44010
|| |||||| || ||||| ||||| || |||| || | | | |||| || ||
Sbjct 687914 TTTCCAAATTATGATGGAAAACATTCACTCTGAAACTTATTCTTTATTATTAGACACATA 687973
Query 44011 CATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGAT 44070
|||||| ||| | || || || || || || || |||||||| | |||| ||
Sbjct 687974 CATCAAGGATCCAAAGGAAAATGATTTCTTATTAAACGCTATAGAAACTATTCCTGAAAT 688033
Query 44071 TAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTT---TGGAGA 44127
||| | || || || ||||| ||| |||||| | || || |||| || ||
Sbjct 688034 TAAGGAAAAGGCTGAATGGGCTATTAGATGGATTCAAGATAAGGACGCTTTGTTTGCTGA 688093
Query 44128 ACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCAT 44187
| |||| || || ||||| | ||| ||||| | || || || || || ||||| || ||
Sbjct 688094 AAGACTGGTTGCTTTTGCTGCTGTTGAAGGTGTCTTTTTCTCTGGTTCATTTGCTGCTAT 688153
Query 44188 ATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAG 44247
|| ||||| |||||| |||||||||||||| ||||| || || || || || || |
Sbjct 688154 CTTCTGGTTGAAGAAAAAGGGTTTGATGCCTGGTTTGACTTTCTCCAACGAATTGATCTG 688213
Query 44248 TCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280
| | |||||||| |||||| || ||||| ||
Sbjct 688214 TAGAGATGAAGGTTTACATACTGACTTTGCCTG 688246
>seq17
Length=230754
Score = 158 bits (174), Expect = 1e-33
Identities = 333/494 (67%), Gaps = 16/494 (3%)
Strand=Plus/Minus
Query 19348 GGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGT 19407
|| ||||| || || || || || ||| || || || || ||||||||| || || ||
Sbjct 69001 GGTCTTTTACTATACGGTCCTCCAGGTACAGGTAAGACTTTGATTGCGAGAAAAATTGGT 68942
Query 19408 AAATTACTTA---CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAA 19464
|| | | | ||||| ||||| || ||||| |||||||||||||| || | |||
Sbjct 68941 AATATGTTGAATGCAAAAGAACCT---AAGATTGTTAATGGTCCTGAAATATTGAGTAAG 68885
Query 19465 TATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAA 19524
||||| ||| || |||||||| | || |||||| || ||||| ||||| |
Sbjct 68884 TATGTTGGTTCTTCTGAAGAAAACATTAGAAATTTGTTCAAGGATGCTGAGCAAGAATAT 68825
Query 19525 AAACGTTTAGGGCGCAAAAGT--TCTTTGCACATTATAATACTAGATGAATTGGACGCAA 19582
|| || || | || | | ||||| |||||||| || | ||||||||||| |
Sbjct 68824 AA--GTCTAAAGGTGAAGAATCATCTTTACACATTATTATCTTTGATGAATTGGATTCTG 68767
Query 19583 TCTGTAAGCAAAGAGGTTC------TGGTGTAAATGGAGTACATGACACTGTTGTCAATC 19636
| | || ||||||||||| || || | || ||| ||| | |||||| || |
Sbjct 68766 TTTTCAAACAAAGAGGTTCAAGAGGTGATGGTACAGGTGTAGGTGATAATGTTGTTAACC 68707
Query 19637 AACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGA 19696
| | | | || | || |||||| | ||| | ||||||||||| |||||||| ||||
Sbjct 68706 AGTTGTTAGCCAAGATGGATGGTGTTGATCAATTAAATAATATTTTGGTTATTGGTATGA 68647
Query 19697 CTAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGA 19756
| |||||| || | ||||| | ||| | || |||| ||| | || ||| | |
Sbjct 68646 CAAATAGAAGAGATCTTATAGATAACGCTCTTTTGAGACCAGGTAGATTTGAAGTTCAAG 68587
Query 19757 TCGAAATTAACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAA 19816
| ||||| || |||| |||||| ||| | || |||||||| | || || ||| ||
Sbjct 68586 TTGAAATCAAGCTACCTGATGAAGCTGGTAGATTGCAAATTTTAGAAATTCAAACAAAAA 68527
Query 19817 CCATGCGACAAAAT 19830
||| || | |||
Sbjct 68526 AAATGAGAGATAAT 68513
>seq12
Length=1055690
Score = 122 bits (134), Expect = 7e-23
Identities = 444/689 (64%), Gaps = 39/689 (6%)
Strand=Plus/Plus
Query 40692 TTTCCGTTGCTAACTACaaaaaaaaTGTTTTGGAAAGGCATTGCAGAAGAACTGTTATGG 40751
||||| || |||| ||||| | | | ||| |||| ||| | |||||| | |||
Sbjct 820067 TTTCCTTTATTAACAACAAARAGAGTATTTACCAAAGCTATTATATTAGAACTTCTTTGG 820126
Query 40752 TTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGA-GGAGTGCACATTTGGAA 40810
||| | || || ||| ||| || || || || ||||| || || | |||||| |
Sbjct 820127 TTTGTTAAGGGAGATACCAATAACAAAAATCTA-CAAAAAGAAGGCGTCAAAATTTGGGA 820185
Query 40811 TGCGCACAGTTCT----AAAACATATTTGTCTAGCATAGGATTACAAGATAGGGATGAAG 40866
|| | ||||| || || || | ||| | || ||| || || || ||||
Sbjct 820186 TGGTAATGGTTCTCGTSAATACCTAGAT-TCTC---TTGGGTTAACTGACAGAGAAGAAG 820241
Query 40867 GTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTA 40926
||||| | |||||||||||||| || || | | |||||||||| || |||||| |
Sbjct 820242 GTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAATATGTTGAT- 820300
Query 40927 TGT-ACTCTGATTATACCAATAAAGGAATGGATCAATTACAGTGCGTTATAG---ATACG 40982
||| || |||| || || || |||||| ||||||||| ||| |||| ||| |
Sbjct 820301 TGTCACACTGACTACACAAACAAAGGATACGATCAATTAA---GCGATATAATTCATAAG 820357
Query 40983 ATTAAATCCGATCC---CGATAGCCGACGTATAATATTGTGCGCGTGGAACCCAACGGAC 41039
| || || |||| |||||| || || || ||| || ||||| ||| | |||
Sbjct 820358 TTGAAGACCAATCCTTACGATAGAAGA---ATCATCATGTCTGCTTGGAATCCACCAGAC 820414
Query 41040 GTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTG------- 41092
| | ||||| | || || || || | || ||||| || || ||||
Sbjct 820415 TTTAAGAAAATGGCTCTTCCGCCATGCCACGTTTTCTGTCAATTCTATGTTTCTTTCCCT 820474
Query 41093 ------CAATGG--TGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTA 41144
||| | | || |||||||| || || |||||||| |||| ||||| |
Sbjct 820475 AAAGACCAAAAGCCTCAATTGTCATGTATCTTATACCAAAGATCTTGTGATATGGGGTTG 820534
Query 41145 GGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACC 41204
|| || || || ||||| || ||||||| || | || ||||||||| | |||
Sbjct 820535 GGTGTTCCTTTCAACATTGCTTCTTATGCTTTGTTGACCAGAATGATTGCAAAGGTTGTT 820594
Query 41205 AATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCAC 41264
|| | | |||||||||| ||||||| | || |||| || |||||| | ||
Sbjct 820595 GATATGGATTGTGGTGAATTTATTCACACCATGGGTGATGCTCACGTTTACAAGGAYCAT 820654
Query 41265 ATAGAGCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATT 41324
|||| | || | ||||||| | | ||| || ||| ||| || || || ||
Sbjct 820655 GTAGATGCTTTRAAAGAACAAMTTGAAAGAACTCCAAGAGAATTCCCTACTTTAGAAATA 820714
Query 41325 AAACGCGCTGTTGAAAACATTGATGATTT 41353
||| | | | || || |||||||||||||
Sbjct 820715 AAAAGAGATATTAAAGACATTGATGATTT 820743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455912808090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |