Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq14 120 3e-22 seq16 98.7 8e-16 >seq14 Length=1507144 Score = 120 bits (132), Expect = 3e-22 Identities = 774/1229 (63%), Gaps = 46/1229 (4%) Strand=Plus/Plus Query 130786 TCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGC 130845 |||| ||| ||||| ||||| ||||| || |||| |||| || || ||||| | Sbjct 780567 TCTAGAGTACATGTTAGAAGTGAATGGTTCGAAACATTCATTGTAACCTAAAATTTGGGA 780626 Query 130846 TGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGAT 130905 |||| || || ||||| || || |||| || || | | ||||||| | | || Sbjct 780627 AGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAAACCGTGCTTGGCAAT 780686 Query 130906 TTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGA-CATTGTTCCACATAT 130964 || |||||||||| ||||||||||| |||| ||| || || |||||| | || Sbjct 780687 CTTAGCCTTCAATTCAGTCCAATCCCATA---RGGTA-GTTGGAGCAACGTTCCAGAAAT 780742 Query 130965 CAAATTGTAGTATGCCTTTACTGGCGGGACTGGATTCGAACGATTCGTAGATTCCTTCGA 131024 | |||||| | |||| | || ||| |||| | || | ||| ||||||| | Sbjct 780743 CGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCATAGGTTCCTTCAA 780802 Query 131025 CACGAGCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTT 131084 ||| | || || |||||||||||| ||| ||||||||||||| |||||| Sbjct 780803 TTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGGTTTCGAAAATTTGAA 780862 Query 131085 TATTTAATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTG 131144 | || |||| || |||| | ||| | |||| | | | | ||||||| || | Sbjct 780863 TGTTCAATTCYTTGGCTTTTTCAGAATCGAATGGAACTCTTAACATCATAAAAGTATCAG 780922 Query 131145 CGAGACCCTGTATCCCAACGCCCACCGGTCTATGTTTTAAATTACATTTACGCGAACATT 131204 | | ||| || | || ||| | | ||||| ||| | | ||| || | | | | || Sbjct 780923 CCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTTAGATCTTCTAGCAGTTT 780982 Query 131205 CGGTGGGATAAAGGTTAATGTCAATTATTTTGTTTAAATT----GC----GCACTACAAT 131256 | || ||| ||| ||||||| | |||||| || || | ||||| Sbjct 780983 CAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTAAGTTCTTAGCAATAACCTTACAAA 781042 Query 131257 TTGTGTGACGCTTTTCAATTTGTCGAAA---TCAAACGTGCCAGTTTC---GAGGTTTAC 131310 | |||| | |||| | |||| || | | | | | ||| || ||||| Sbjct 781043 CTTCGTGAAGTTTTTTGA--AGTCGTAAGTTTGAGTCTTTTGATCTTCKGAGACCTTTAC 781100 Query 131311 AAA--TTGATTTACACATATTGACGCCAGATTACAAACTGCCGTTTCGTCATAATCGCAA 131368 ||| || | | || | || || | |||||||| || ||||| | || ||| | Sbjct 781101 AAAGGCTG-GTAAGGCA-ACAGARGCTAAGTTACAAACAGCAGTTTCCTTATCATCTGAG 781158 Query 131369 TACTGAACAATTTCGGCGCACAAATTACTGCTCTTTATGGTGCCCAAATTTTGTTGATTG 131428 || | ||||||||| || || ||| || || || ||||| || | |||||| Sbjct 781159 TATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCCAAGTTCTTTTGATTA 781218 Query 131429 CTTTTAGCATTCACATG-GTCCTTGTACATCATGTAGGGCGTGCCCGTTTCGACTTGAGT 131487 ||| ||| ||| | |||||||| | ||| | || || || |||||| ||| | Sbjct 781219 GATTTTTTATT-ACAAGCATCCTTGTAAACAATGAAAGGAGTACCAGTTTCGGTTTGGGC 781277 Query 131488 TTCAATAATGTATCGAA--AGAGTTTTCGAGCAGACAATTGATATTTGTA--TTGGCCGC 131543 ||| ||| | || | | | ||| |||| | || | ||| || | || Sbjct 781278 TTC--TAAGATGGCGTACCATAACTTTTGAGCCTTGA--TGGTCTTTCTACCTCTACCTT 781333 Query 131544 GTTTTTCGTAATTTTCGTACAACGTTTCAAAGTTTTGGCCAAACGAACTGTCCAAATTGG 131603 | |||||| | || || | | ||||||||| | ||| | | | |||| | Sbjct 781334 CTAGTTCGTATTGGTCATAWAGCTTTTCAAAGTCATCACCATAAGCATCRCTCAAACCAG 781393 Query 131604 GACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAACA 131663 || ||| || ||| | | || | ||| | || || | |||| |||||| |||| Sbjct 781394 GAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCTCTTCATGAACA 781453 Query 131664 AATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATAA 131723 | || || | |||||| || || | |||||||||| | | ||||| |||| | Sbjct 781454 AGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTTACCGTGAT 781513 Query 131724 tttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCA 131783 ||||| | | | | || || || || || | ||||| ||||| | |||| || | Sbjct 781514 TTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAGGTACAGAGCAA 781573 Query 131784 TTGCGCC------TTTGCGCTTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATA 131837 || || |||| ||||| ||||||| ||||| | | |||||||| | | Sbjct 781574 AGGCACCAGGTCTTTTG---TTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAA 781630 Query 131838 CGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCAT 131897 | | | ||| || |||||| |||| | |||||||| | |||||| |||| Sbjct 781631 CTCTAACCATAGGAATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTAAGAGCCAG 781690 Query 131898 TGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCG 131956 ||| |||||| ||||||| || | |||||||| || || || ||||| ||| | || Sbjct 781691 TGGATCTGATGTTGTGAATGTGTAAACCAATACCACCKGCAGT-CTTAGAAATTTGAGCA 781749 Query 131957 CATTTGGTTAGAGTGTTATAGATACCTTC 131985 |||| | | || | ||||||||| || Sbjct 781750 CATTCCTTYAAGGTATCATAGATACCGTC 781778 >seq16 Length=726111 Score = 98.7 bits (108), Expect = 8e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 || || ||||||||||| ||||| || | | ||||| | | ||||| | |||||||| Sbjct 202536 GTGGATTCTTTTTGAATGTTGTAATCAGATAATGTTCTAC-CATCTTCTAATTGTTTACC 202478 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 |||| |||| | | |||||||| || || | ||| || ||||| ||| || ||| Sbjct 202477 GGCGAAAATCAATCTTTGTTGATCAGGAGGAATACCTTCCTTATCTTGGATTTTAGATTT 202418 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | || | || ||| | | ||||||||||| ||| || | || || || | ||| Sbjct 202417 GACAGCGTCGATAGAGTCACTAGATTCAACTTCTAAAGTGATGGTCTTACCAGTTAAAGT 202358 Query 27230 TTTCACAAAGATTTGCAT 27247 ||| |||||||||||||| Sbjct 202357 TTTAACAAAGATTTGCAT 202340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934306780016