Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq14 320 2e-82 seq1 113 6e-20 >seq14 Length=1507144 Score = 320 bits (354), Expect = 2e-82 Identities = 950/1453 (65%), Gaps = 47/1453 (3%) Strand=Plus/Plus Query 110668 GTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGG 110727 ||||||||| | ||||| | | |||||||| ||| ||||| | ||| |||| Sbjct 780534 GTTGACAATTTGGTATTCACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGG 780593 Query 110728 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 110787 ||| || |||||||| | ||| || ||||| | || || || |||||||| || || | Sbjct 780594 TTCGAAACATTCATTGTAACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAAC 780653 Query 110788 CAAAAGACTGTTACGAAGACCCTTCTCCTTGAT----GCGTTCC-TTGAGAACA-TCCCA 110841 ||| | ||| | | ||| | || || || ||| || || || ||||| Sbjct 780654 CAATAAGGAGTTTCTTAAACCGTGCTTGGCAATCTTAGCCTTCAATTCAGTCCAATCCCA 780713 Query 110842 GTCG-TAGTTG-AGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGAC 110899 | |||||| ||| ||| ||| | || | || | || ||||| || Sbjct 780714 TARGGTAGTTGGAGCAACGTT--------CCAGAAATCGTATTGTAAAACACCTTGAGAA 780765 Query 110900 GCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCC 110959 || |||||||| || | | |||||| |||| |||||| |||||| | || Sbjct 780766 GCTGGAGAACCTTCGTAAGAAGCATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCT 780825 Query 110960 TCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCT 111019 |||| | |||||||| |||||||| || || || |||| || ||||||| || Sbjct 780826 TCCAAAGCAGCGTGATAAATGGTTTCGAAAATTTGAATGTTCAATTCYTTGGCTTTTTCA 780885 Query 111020 GAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 111079 ||||| |||| | ||| ||||| ||| || | |||||||||||| | || Sbjct 780886 GAATCGAATGGAACTCTTAACATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCA 780945 Query 111080 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCA 111139 ||||||||||||| ||| ||||| ||| ||||| ||||| || ||| | ||||||||| Sbjct 780946 ATAGGTCTGTGTCTCATGTTAGATCTTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCA 781005 Query 111140 ATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA 111199 || || ||||| || || | || || ||| | ||| |||||||||| | || Sbjct 781006 ATAACAGCGTTTAAGTTCTTAGCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCG 781065 Query 111200 AAAGTGCGAGTCTCTTCAT------------TGACATACTTTGGAAGGGCGATTGATGCC 111247 |||| |||||| || || | ||| | ||| | ||| | || || Sbjct 781066 TAAGTTTGAGTCTTTTGATCTTCKGAGACCTTTACAAAGGCTGGTAAGGCAACAGARGCT 781125 Query 111248 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTG 111307 || || |||||||| || || | | ||||| ||| || | |||||| ||||||||| Sbjct 781126 AAGTTACAAACAGCAGTTTCCTTATCATCTGAGTATTCAACAATTTCACAACATAAGTTA 781185 Query 111308 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAG 111367 ||| ||||| || ||||| |||||||| ||| || || || || ||||||||||| Sbjct 781186 GAAGATTTAATTGTACCCAAGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAA 781245 Query 111368 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGC 111426 | ||| | || || || || || || || | || | || || | ||| ||| | | Sbjct 781246 ACAATGAAAGGAGTACCAGTTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGA 781305 Query 111427 GGCTGGTACAATGGCGT---TGGCCCGTCCCTCCGCCTCGTACTTTGT-GTAGAGGGCTT 111482 | || | |||| | | | | || || ||||| || || || || || Sbjct 781306 GCCTTG----ATGGTCTTTCTACCTCTACCTTCTAGTTCGTA-TTGGTCATAWAGCTTTT 781360 Query 111483 CAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT-GGACAGAAAAGAGAC 111541 |||| || ||||| || || | ||| || | ||| || ||| |||| | || | Sbjct 781361 CAAAGTCATCACCATAAGCATCRCTCAAACCAGGAG-CTTCACTAGGAGAGAATAAAGTC 781419 Query 111542 CATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAG 111601 || | |||| | ||| || | ||||||||| | ||| |||||||| | | || || Sbjct 781420 CAATCACCATTTGCCTTGACTCTCTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAAT 781479 Query 111602 AGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCAT 111660 | ||||||| | | || ||||| | ||| || || || | || | ||| || | Sbjct 781480 AAATCTCTAGCTCTGA-TTTCTTCCTTACCGTGATTTTTTCTGATGTCGATGAAATCAAA 781538 Query 111661 GATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAG 111716 |||||| | ||||||||| || || || | || | | || |||| | ||| Sbjct 781539 GATATCAGAGTGCCATGGTTCTAGGTACAGAGCAAAGGCACCAGGTCTTTTG-TTACCAC 781597 Query 111717 CTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTG 111776 |||||| ||||| | || ||| ||| || || | || ||| ||||| | ||||| | Sbjct 781598 CTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCTAACCATAGGAATCAAACCATTGG 781657 Query 111777 ATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCC 111836 | |||||| || || ||| ||| | ||| ||| | | || ||||| | | Sbjct 781658 AAGTACCATTGGTACCAGCAATGTAAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAAC 781717 Query 111837 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 111896 ||||||| || || ||| || ||||| ||||| ||| | | || |||||||||||| Sbjct 781718 CAATACCACCKGCAGTCTTAGAAATTTGAGCACATTCCTTYAAGGTATCATAGATACCGT 781777 Query 111897 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 111956 || || || ||||| | | || | ||| ||| ||||| || |||||||| |||| Sbjct 781778 CAATAGAATCATCCTTCATAGAAATTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTAC 781837 Query 111957 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATG 112016 |||||||||| || ||||| | || || | || | ||| |||||| || ||| | Sbjct 781838 CAGCATTGAATAGTGTTGGAGAAGCATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAG 781897 Query 112017 TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGT 112076 | || | ||| ||||||| ||| |||||||| || | || || | ||| | || | Sbjct 781898 TTTCGATGACTTTTTCAATGTTTTCACCGTGGATACCAACAGCAACTCTCATRATCAAAT 781957 Query 112077 ACTGTGGGGTTTC 112089 ||||| |||| Sbjct 781958 GTTGTGGTCTTTC 781970 >seq1 Length=1289090 Score = 113 bits (124), Expect = 6e-20 Identities = 345/524 (66%), Gaps = 13/524 (2%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || || | ||| ||||||| | || | ||| || ||||| | ||| Sbjct 688244 GGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACC 688185 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGA 122776 ||||| | |||| ||||||||||| | ||||| ||| ||||| || ||||| |||| Sbjct 688184 AGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCA-AATGAACCAGAGAAAAAGA 688126 Query 122777 TACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA-GGAGCGAGACTTTGCATCA 122835 ||| || ||| ||||| |||| || | ||| || || |||| ||| | | | Sbjct 688125 CACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCG-TCCTTATCTTGA 688067 Query 122836 AACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCA 122895 | |||| | || ||||||| ||||| | || ||| || | ||||| || || | Sbjct 688066 ATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTT 688007 Query 122896 AATAACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTT 122955 ||||| | ||||| | |||||| |||||| |||| | ||| ||||| ||| Sbjct 688006 AATAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTT 687947 Query 122956 TCGCCATGAACCATTT-CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTAT 123014 || |||| ||| ||| || ||| | ||||||| | ||||| || Sbjct 687946 TCAGAGTGAATGTTTTCCATCAT-AATTTGGAAACCGTAGAAACACTTAGCTTCTGGAAT 687888 Query 123015 CTGAACCTCATCCGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGC 123074 ||||| ||| | | || || | | | || ||| ||||| ||||| || |||| Sbjct 687887 TTGAACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGC 687828 Query 123075 AAAGAATGCCAGGATGTACTT--TATGAATTTCTTTTCATTTTCATTCA---GGGTCTTC 123129 |||||| |||| | ||| ||||| ||||||||||||||| | | ||| Sbjct 687827 AAAGAAAGCCA--AKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTC 687770 Query 123130 CAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 || |||| | ||| || |||||||| | |||||| || ||||| Sbjct 687769 CAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCA 687726 Score = 89.7 bits (98), Expect = 6e-13 Identities = 166/239 (69%), Gaps = 10/239 (4%) Strand=Plus/Minus Query 11578 TTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGTTGCTTGCCCACCG-CATCAA 11636 |||||| |||||||| | ||||| ||||| | | |||| ||| | |||| | Sbjct 433421 TTCTCTTTCATCATTACC------ACCACTAGCACCTC-TGGCTTTACCAATGGCATCGA 433369 Query 11637 TCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAA 11696 | ||||||||||| | |||| ||| ||||| | ||| ||||||| ||||| | | Sbjct 433368 TTTCATCAATGAAAATGATACTTGGGGCATTTTTTCTGGCTGTTTCAAATAGATCTCTTA 433309 Query 11697 CCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGAT-G 11755 | || ||||||| ||| ||||||||||| ||||| | || |||| || | || | Sbjct 433308 CTCTGGAAGCACCCATACCTACAAACATCTCAACAAATTCAGCACCAGA-AACAGAATAG 433250 Query 11756 AATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 ||||| ||| || ||||| || | || ||| | || ||||| || |||||||| Sbjct 433249 AATGGCACACCTGCCTCACCGGCAGTTGCCTTGGCCAAAAGAGTCTTACCTGTACCTGG 433191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031858692800