Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq14 275 7e-69 seq1 100 3e-16 seq13 84.2 3e-11 >seq14 Length=1507144 Score = 275 bits (304), Expect = 7e-69 Identities = 1131/1761 (64%), Gaps = 63/1761 (4%) Strand=Plus/Minus Query 104216 GAAACCCCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGAT 104275 |||| ||||| | || | ||| | || || | ||||| || || ||| ||||||| Sbjct 781970 GAAAGACCACAACATTTGATYATGAGAGTTGCTGTTGGTATCCACGGTGAAAACATTGAA 781911 Query 104276 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACC 104335 ||| | || || ||| || |||||| ||| | || | || || | ||||| Sbjct 781910 AAAGTCATCGAAACTTACAACTTGATGTCTCAAAGATACTTTACCCATGCTTCTCCAACA 781851 Query 104336 CTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAG 104395 || |||||||||||||| |||||||| |||||||| ||| ||| | || | | ||| Sbjct 781850 CTATTCAATGCTGGTACTCCAAGACCTCAAATGTCTTCTTGTTTCTTAATTTCTATGAAG 781791 Query 104396 GAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGG 104455 || || || || |||||||||||| || | | ||| ||||| ||||| || ||| Sbjct 781790 GATGATTCTATTGACGGTATCTATGATACCTTRAAGGAATGTGCTCAAATTTCTAAGACT 781731 Query 104456 GCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGG 104515 || || |||||||| | ||||| || | | ||| ||| | ||| ||| || Sbjct 781730 GCMGGTGGTATTGGTTTACACATTCACAACATCAGATCCACTGGCTCTTACATTGCTGGT 781671 Query 104516 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 104575 || |||||| || ||||| | ||||| ||| || | || || ||| ||| || | Sbjct 781670 ACCAATGGTACTTCCAATGGTTTGATTCCTATGGTTAGAGTTTTCAACAACACTGCCAGA 781611 Query 104576 TATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATG 104631 ||||| |||||| | || | |||| || | | || | || || || ||||| Sbjct 781610 TATGTTGATCAAGGT-GGTAACAAAAGACCTGGTGCCTTTGCTCTGTACCTAGAACCATG 781552 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 |||| | |||||| | || ||| | || | | || || ||| | || || | Sbjct 781551 GCACTCTGATATCTTTGATTTCATCGACATCAGAAAAAATCACGGTAAGGAAGA-AATCA 781493 Query 104692 GTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750 | || | ||| | ||| | ||| | |||||||| || | |||||||||||||| ||| Sbjct 781492 GAGCTAGAGATTTATTCCCAGCTTTATGGATTCCTGACTTGTTCATGAAGAGAGTCAAGG 781433 Query 104751 AGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCTGGTCTCTCCGATGCCGTG 104809 | ||| ||||| || | || | ||| || || || |||||| | ||||| Sbjct 781432 CAAATGGTGATTGGACTTTATTCTCTCCTAGTGAA-GCTCCTGGTTTGAGYGATGCTTAT 781374 Query 104810 GGTGAGGAGTTTGAAGCCCTTTA-CACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGAC 104868 ||||| || |||||| || || || || ||||| ||||||| | | | ||| Sbjct 781373 GGTGATGACTTTGAAAAGCTWTATGACCAA-TACGAACTAGAAGGTAGAGGTAGAAAGAC 781315 Query 104869 GGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 | ||| | | ||| | || || | | | |||||||| |||||||| || Sbjct 781314 CATCAAGGCTCAAAAGTTATGGTACGCCATCTTAGAAGCCCAAACCGAAACTGGTACTCC 781255 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 | ||| ||||||| || || ||||| |||| |||||||||||| |||||| || Sbjct 781254 TTTCATTGTTTACAAGGATGCTTGTAATAAAAAATCTAATCAAAAGAACTTGGGTACAAT 781195 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 || ||| || | ||| ||||| | |||| |||| | | || || ||||| Sbjct 781194 TAAATCTTCTAACTTATGTTGTGAAATTGTTGAATACTCAGATGATAAGGAAACTGCTGT 781135 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCC---------CAAG---TATGTGGATCCAGAGAC 105096 |||||| | || || | || | || ||| | | |||| | |||| Sbjct 781134 TTGTAACTTAGCYTCTGTTGCCTTACCAGCCTTTGTAAAGGTCTCMGAAGATCAAAAGAC 781075 Query 105097 AAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAA 105156 | || | || | ||||||| ||||||||| || | | | || ||| |||| Sbjct 781074 TCAAACTTACGACTTCAAAAAACTTCACGAAGTTTGTAAGGTTATTGCTAAGAACTTAAA 781015 Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 105216 | |||||||| ||||| | |||||| ||||| |||||| | | |||||| |||||||| Sbjct 781014 CGCTGTTATTGACAGAAACTATTACCCTGTTGAAACTGCTAGAAGATCTAACATGAGACA 780955 Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGC 105276 | | || |||| | |||||||| ||| | || ||| || || | | | | Sbjct 780954 CAGACCTATTGCCGTAGGTGTTCAAGGTTTGGCTGATACTTTTATGATGTTAAGAGTTCC 780895 Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336 ||| ||||| || |||| || ||| | || | || || || ||||| |||||||| Sbjct 780894 ATTCGATTCTGAAAAAGCCAARGAATTGAACATTCAAATTTTCGAAACCATTTATCACGC 780835 Query 105337 CGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 105396 ||| | || || | || || || || |||| || | |||| | | || || Sbjct 780834 TGCTTTGGAAGCTTCCACTGAATTAGCTGAAATTGAAGGAACCTATGCTTCTTACGAAGG 780775 Query 105397 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA 105456 |||||||||||| ||||| || | |||| ||| | | |||| || |||| || | Sbjct 780774 TTCTCCAGCTTCTCAAGGTGTTTTACAATACGATTTCT-GGAACGTTGCTCCAA-CTACC 780717 Query 105457 CTACGACTGGGA-AGCTCTCAA-GGAACGC----ATCAAGGAGAAGGGTCTTCGTAACAG 105510 || ||||| | || || ||| || || || | ||| ||| | Sbjct 780716 YTA----TGGGATTGGACTGAATTGAAGGCTAAGATTGCCAAGCACGGT----TTAAGAA 780665 Query 105511 TCTCCTCA----TGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATG 105566 ||||| | | ||||| |||||||| || || || | ||||| || ||| | |||| Sbjct 780664 ACTCCTTATTGGTTGCTCCTATGCCAACTGCTTCTACTTCCCAAATTTTAGGTTACAATG 780605 Query 105567 AATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTT 105625 |||| || ||||| | ||| | ||||| || ||| |||||||| | | || || | Sbjct 780604 AATGTTTCGAACCATTCACTTCTAACATGTACTCT-AGAAGAACTTTATCTGGTGAATAC 780546 Query 105626 GTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGAT 105685 ||||||||| | | || | || | || || ||| | ||| | | Sbjct 780545 CAAATTGTCAACCCATACTTATTGAAGGATTTAGTTGATATGGGTATTTGGGATGAAGCC 780486 Query 105686 ATGAAG---GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTG-TGGATATTCC 105741 |||||| || |||| | || |||||| || ||| | |||| | ||||| Sbjct 780485 ATGAAGTCTAATATCATTGCTAA---CAATGGTTCTATCCAACA-ATTGCCAAACATTCC 780430 Query 105742 AAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAA--ATCAAGATGAAGGATGTCATT 105799 | ||||| ||| | ||||| || ||||||||| |||| | ||| | ||||| Sbjct 780429 TCAAGAAATGAAGGATTTGTATAAAACTGTTTGGGAATTATCACAA--AAGACTATCATT 780372 Query 105800 GACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAA---TCTCTTC 105856 || |||||||| ||| | |||||||||||| ||| ||||| || | || Sbjct 780371 GATATGGCCGCTGATAGACAAGCTTTCATTGATCAATCTCATTCCATGAACATTCACATC 780312 Query 105857 ATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGT 105916 |||| ||||| ||| ||| | |||| |||||| | ||| |||||| |||||| Sbjct 780311 ATGG---CCCCAACTATGGGTAAGTTAACTTCCATGCACTTCTACGGTTGGAGCAAGGGT 780255 Query 105917 CTCAAAACGGGGATGTATTAC 105937 | || || || ||||| ||| Sbjct 780254 TTGAAGACTGGTATGTACTAC 780234 >seq1 Length=1289090 Score = 100 bits (110), Expect = 3e-16 Identities = 213/312 (68%), Gaps = 11/312 (4%) Strand=Plus/Minus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 |||||||| | || ||||| |||||| | ||| ||| | ||||||||| | Sbjct 433459 AAACCATCTAGTTCGACCAAAATTTGGTTTAAAGTGGCTTCTCTTTCATCATTACC---- 433404 Query 9674 ATACCACCAGCACTGCGTTGCTTTCCCAC-GGCATCAATCTCATCAATGAAGACGATGCA 9732 ||||| ||||| | | ||||| ||| |||||| || ||||||||||| | ||| | Sbjct 433403 --ACCACTAGCACCTC-TGGCTTTACCAATGGCATCGATTTCATCAATGAAAATGATACT 433347 Query 9733 TGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 9792 ||| ||||| | || |||||| ||||| | ||| | || |||| ||| || Sbjct 433346 TGGGGCATTTTTTCTGGCTGTTTCAAATAGATCTCTTACTCTGGAAGCACCCATACCTAC 433287 Query 9793 AAACATCTCCACAAAGTTTGCGGCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCG 9851 ||||||||| ||||| | || | ||| | | || ||| || ||| | ||||| | Sbjct 433286 AAACATCTCAACAAATTCAGCACCAGAA-ACAGAATAGAATGGCACACCTGCCTCACCGG 433228 Query 9852 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTC 9911 || | || ||| | |||||||||||| |||||||| ||| | | | ||||||| Sbjct 433227 CAGTTGCCTTGGCCAAAAGAGTCTTACCTGTACCTGGAGGACCAGACAAAATAGCACCTC 433168 Query 9912 GTGG-AATCTTG 9922 || ||||||| Sbjct 433167 TAGGTAATCTTG 433156 Score = 86.0 bits (94), Expect = 7e-12 Identities = 224/334 (67%), Gaps = 6/334 (2%) Strand=Plus/Plus Query 169171 ACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATACCG 169230 ||||||||| |||||||| || | ||| ||| ||||||||||| | | ||||||| | Sbjct 69992 ACCCTTGATATGGGAACCATCATAATCTTGATCAGTCATGATCATTAAATGACCATATCT 70051 Query 169231 AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATC 169290 | | ||||||| ||| ||| ||||| | ||||| || ||||||| | | Sbjct 70052 TAAAGAAGTAACATCTGTATAAGTCTTTTTATGTTGTAAACCCATAATTTTCTTGATAGC 70111 Query 169291 GTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTACAC- 169348 ||||| ||||| ||| ||| ||| |||| ||||| | ||||| | | || Sbjct 70112 -TTGAATTTCTTGATTTTTATTGACCTGATCAGCAGAAGCATCTCTGACATT-TAAGACT 70169 Query 169349 TTCCCACGAAGAGGGAAGACA-CCGTAGTGATCACGACCAACGACGGAGAGACCCGCGAC 169407 || || | | ||| | ||| ||||| | ||| | |||||| | || | ||| || || Sbjct 70170 TTACCTCTTAATGGGTA-ACATCCGTAATAATCTCTACCAACAATAGACAAACCAGCAAC 70228 Query 169408 TGCGAGAGTCTTCGCCGAGTCACCCTCGGTGACGATGAGCGTACATTTTCCAGATTGTGC 169467 || | | ||| || || ||||| || || | | | |||||||| | | | Sbjct 70229 AGCCAATGACTTGGCAGAATCACCTTCTGTTAATAGTAAAGTACATTTATGACCCTCTCT 70288 Query 169468 CGTACCCGCCTTGTTCGCATCATCCAATTTGGGA 169501 ||||| |||||||| ||||| || ||||| ||| Sbjct 70289 AGTACCGGCCTTGTTAGCATCTTCTAATTTAGGA 70322 >seq13 Length=1922431 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/129 (75%), Gaps = 4/129 (3%) Strand=Plus/Minus Query 154116 TTGCGCCACGATCTGGTCTCGCTGTGAAACATGGTAT--CCAAGTTGGTGCGGGTGTTGT 154173 |||| ||| |||| ||| | || || || | ||||| ||| |||||| |||||||| Sbjct 1768730 TTGCCCCAAGATCAGGTTTAGCCGTCAAGAACGGTATTTCCAC--TGGTGCTGGTGTTGT 1768673 Query 154174 TGATCCCGACTACACGGGTGAAGTCAAAGTCGTTCTTTTCAATCACGGAGACAAAGACTT 154233 |||| || || || |||||||| ||||| ||| | ||||| || || || || ||||| Sbjct 1768672 TGATAGAGATTATACCGGTGAAGTTAAAGTTGTTTTATTCAACCATGGTGAAAACGACTT 1768613 Query 154234 TGAGGTAAA 154242 ||| ||||| Sbjct 1768612 TGAAGTAAA 1768604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260668766320