Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_028104.1
Length=73689
Score E
Sequences producing significant alignments: (Bits) Value
seq1 87.8 8e-13
>seq1
Length=1289090
Score = 87.8 bits (96), Expect = 8e-13
Identities = 379/586 (65%), Gaps = 15/586 (3%)
Strand=Plus/Plus
Query 64876 AATGTCAGTACTAAATCCTGTGCCAATACCCTTTGAGCCATTTATTAAAATCATCGGAAT 64935
||| | |||||| | ||||| |||||||| | ||||| | |||||||| || ||
Sbjct 69077 AATATAAGTACTCCAACCTGTACCAATACCTTCACCACCATTGACCAAAATCATAGGTAT 69136
Query 64936 AATTGGTGCATAAAAGATAGGCTCAACAATGAGACCATCATCATCCAAATACTTCAAAAT 64995
|| || ||||| | || |||| | | |||| || | || || ||||| |
Sbjct 69137 AACAGGAGCATACCACTCTGGTTCAATAGTCTTTTCATCTTCTTGTAAGTATTTCAATAA 69196
Query 64996 GGCATCATCCTCTTT-TGGAAATATAGAACGAGTTATTTTATTCAATTGAGTATAAATAT 65054
|| | || || || |||||| ||||| |||| ||||||||| || ||| ||||||
Sbjct 69197 AGCGTTGTCATCCTTGTGGAAA-ATAGATGAGGTTAGTTTATTCAAATGGGTAAAAATAT 69255
Query 65055 ATCTTTCGGATGCGTGGTCTT---GTCCAGTTCGTCGTGTTCCAAACTGACCATTTGGCA 65111
||||| | | || ||||| ||||| || || ||||| ||| |||||||
Sbjct 69256 ATCTTGCAGCAGCAGCGTCTTTACCACCAGTGGCTCTAGTACCAAAGGCACCCTTTGGCA 69315
Query 65112 TTAATAAATTAATATTGTTTGAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCAT 65171
| | | || || || || | ||||| ||||| || || | |||||||| | | |
Sbjct 69316 TCATCATATAGATGTTATTGGTACCAACAAAATCTTGGGCTAATCCGATAACAGTTTGAA 69375
Query 65172 TTAAACTCGCTTCACCGTGATGATATCCTGAATG--TTCAGAGACATATCCACTAAATTG 65229
|||| || ||||| ||||| || || | || ||||||| ||| | |||
Sbjct 69376 CTAAAGAAGCGTCACCATGATGGTA--CTCAGTGGCAGCAGAGACGTATTGAGCAAAGGT 69433
Query 65230 AGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAATGCAGAATACAATA-TTTTCCGTA 65288
| ||| || || || | | ||| | ||| || ||| | | | | ||||| |
Sbjct 69434 GGAAACCTTCATATCTCTAACAACATTATGTTTTAAAGCACCAAAGATGACTTTTCTTTG 69493
Query 65289 AACTAATTTTCAATCCATCCATTAAATTAGGAATGCTTCTGTCACAATCATATTTTGAGA 65348
||| | || || |||||||| | ||||||||| |||| |||| ||| |
Sbjct 69494 AAC-AGGCTTGAAACCATCCATGACATTAGGAATAGATCTGATGTTATCAGCCAATGAAA 69552
Query 65349 AATGTATGAATTCTTTGTTAAT-AAATTCTTCATATGAAACACTCGTATTATCTGTATTC 65407
| || |||||||| ||||| |||| || ||| ||| || || | | | || |
Sbjct 69553 ATAAAATCAATTCTTTATTAATGAAATCTTTTATAGGAATAACATCTAGTGT-AGGATCC 69611
Query 65408 AAATAACTATCGCGATTATATTTTTCTAA-CCATTCTTTTCTATCA 65452
||| | || | | | || || ||||| ||||||||||||||||
Sbjct 69612 AAAAAGGTACCTGGTTCAT-GTTGTCTAAGCCATTCTTTTCTATCA 69656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 235679948297700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |