Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq16 93.3 3e-14
seq15 87.8 1e-12
>seq16
Length=726111
Score = 93.3 bits (102), Expect = 3e-14
Identities = 152/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554
|| || | |||||||||| || ||||||||||| ||||| || | ||||| | |||
Sbjct 202551 AAGACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGATAATGTTCTACCATCT 202492
Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614
|| | |||||||||||| || || || | ||||| || || || | || ||||| |||
Sbjct 202491 TCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAGGAATACCTTCCTTATCT 202432
Query 34615 GTGATCTTTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCG 34672
||| ||| | ||| || | || | ||| | | | || ||||| | || || |
Sbjct 202431 TGGAT-TTTAGATTTGACAGCGTCGATAGAGTCACTAGAT-TCAACTTCTAAAGTGATGG 202374
Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| ||||| ||||| ||||| ||||| || |||||
Sbjct 202373 TCTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 202340
>seq15
Length=137011
Score = 87.8 bits (96), Expect = 1e-12
Identities = 140/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557
|| || || ||||| || ||||| ||||| ||||| || | |||| |||||||
Sbjct 38906 ACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGATAAGGTTCTACCGTCTTCT 38965
Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
| ||||||||| ||||| ||||| | ||||| || || || | || ||||||||| |
Sbjct 38966 AATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGG 39025
Query 34618 ATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677
||||| || | | ||| || || | || ||||||| || || || |||
Sbjct 39026 ATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGACTTCCAAAGTGATGGTCTTA 39085
Query 34678 CCGGTTAACGTTTTCACAAAA 34698
|||||||| || || ||||||
Sbjct 39086 CCGGTTAAGGTCTTGACAAAA 39106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729530956194
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |