Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq16 93.3 3e-14 seq15 87.8 1e-12 >seq16 Length=726111 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554 || || | |||||||||| || ||||||||||| ||||| || | ||||| | ||| Sbjct 202551 AAGACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGATAATGTTCTACCATCT 202492 Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614 || | |||||||||||| || || || | ||||| || || || | || ||||| ||| Sbjct 202491 TCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAGGAATACCTTCCTTATCT 202432 Query 34615 GTGATCTTTTGTTTTAAC-GATAAAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCG 34672 ||| ||| | ||| || | || | ||| | | | || ||||| | || || | Sbjct 202431 TGGAT-TTTAGATTTGACAGCGTCGATAGAGTCACTAGAT-TCAACTTCTAAAGTGATGG 202374 Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||| ||||| ||||| ||||| || ||||| Sbjct 202373 TCTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 202340 >seq15 Length=137011 Score = 87.8 bits (96), Expect = 1e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 || || || ||||| || ||||| ||||| ||||| || | |||| ||||||| Sbjct 38906 ACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGATAAGGTTCTACCGTCTTCT 38965 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||||||||| ||||| ||||| | ||||| || || || | || ||||||||| | Sbjct 38966 AATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGG 39025 Query 34618 ATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677 ||||| || | | ||| || || | || ||||||| || || || ||| Sbjct 39026 ATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGACTTCCAAAGTGATGGTCTTA 39085 Query 34678 CCGGTTAACGTTTTCACAAAA 34698 |||||||| || || |||||| Sbjct 39086 CCGGTTAAGGTCTTGACAAAA 39106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314729530956194