Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq18 131 1e-25
seq16 113 4e-20
seq15 109 5e-19
>seq18
Length=436904
Score = 131 bits (144), Expect = 1e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || ||||||||||| || || ||| | |||||| | || || ||| | ||
Sbjct 25388 ATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTCT 25447
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| || || || | || || ||||| |||||||||||||| || ||||| ||||||
Sbjct 25448 GATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGATCAA 25507
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | ||||| | ||| || || ||||| ||||| || || | || || ||||||
Sbjct 25508 CAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAAC 25567
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTT 27199
|||||||| || || || ||||| || || ||
Sbjct 25568 ATTCAAAAAGAATCCACTTTACACTTAGTCTT 25599
>seq16
Length=726111
Score = 113 bits (124), Expect = 4e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 26980 TATACGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGG 27039
||| | | ||||| || ||||| |||||| | || || ||| | || ||| | ||||| |
Sbjct 202332 TATCCACAATGCAAATCTTTGTTAAAACTTTAACTGGTAAGACCATCACTTTAGAAGTTG 202391
Query 27040 AACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCAC 27099
|| | ||||| || || |||||| ||||| ||||| || ||||| || || |
Sbjct 202392 AATCTAGTGACTCTATCGACGCTGTCAAATCTAAAATCCAAGATAAGGAAGGTATTCCTC 202451
Query 27100 CCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCG 27159
| |||||||| | || || | |||||| |||||||| ||||| || || | || |
Sbjct 202452 CTGATCAACAAAGATTGATTTTCGCCGGTAAACAATTAGAAGATGGTAGAACATTATCTG 202511
Query 27160 ATTACAACATTCAAAAGGAGTCGAC 27184
|||||||||||||||| || || ||
Sbjct 202512 ATTACAACATTCAAAAAGAATCCAC 202536
>seq15
Length=137011
Score = 109 bits (120), Expect = 5e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
||||| || || | ||||| ||| | || ||| | ||||| ||| | | || | |||
Sbjct 39105 TTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTATT 39046
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| ||||| || || |||||||| ||||| || ||||| |||||||| | |||
Sbjct 39045 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 38986
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | || || |||||||| |||||| || ||| | || ||||||||||| |||||
Sbjct 38985 ATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAA 38926
Query 27177 GAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|| || || |||| || ||| | | ||| | |||||
Sbjct 38925 GAATCTACTCTACACTTAGTTCTAAGATTGAGAGGTGG 38888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918302143360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |