Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq18 165 2e-35
seq16 161 2e-34
seq15 150 4e-31
seq14 96.9 8e-15
>seq18
Length=436904
Score = 165 bits (182), Expect = 2e-35
Identities = 168/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| | ||| | ||| | ||||||||||||||| | ||||| || | |||||||| ||
Sbjct 25603 TCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACC 25544
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||||| ||||| ||||||||||| | || |||||| || || ||||||||||| ||
Sbjct 25543 ATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCTTT 25484
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||||||| || ||| ||| ||||| | || || | ||| || || || || ||
Sbjct 25483 GTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACCTCCAAAGTAAT 25424
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || | |||||||| ||| | |||||||||
Sbjct 25423 GGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 25385
>seq16
Length=726111
Score = 161 bits (178), Expect = 2e-34
Identities = 166/217 (76%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| | ||| || |||||||||||||||||||| | |||||||| | || ||||| ||
Sbjct 202555 TCTTAAGACTAGATGGAGAGTGGATTCTTTTTGAATGTTGTAATCAGATAATGTTCTACC 202496
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||||| || || || ||||| || | || |||||| || || ||||||||||||||
Sbjct 202495 ATCTTCTAATTGTTTACCGGCGAAAATCAATCTTTGTTGATCAGGAGGAATACCTTCCTT 202436
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||| || || ||||| ||||| | ||| | ||| || ||||| |||||
Sbjct 202435 ATCTTGGATTTTAGATTTGACAGCGTCGATAGAGTCACTAGATTCAACTTCTAAAGTGAT 202376
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
||||| || || |||||||| | || | |||||||
Sbjct 202375 GGTCTTACCAGTTAAAGTTTTAACAAAGATTTGCATT 202339
>seq15
Length=137011
Score = 150 bits (166), Expect = 4e-31
Identities = 154/201 (77%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||| || || | ||| ||||| ||||||||||||| |||||||| | || ||||| ||
Sbjct 38899 TCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGATAAGGTTCTACC 38958
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||||| || || ||||| ||||| | || |||||| || || ||||||||||||||
Sbjct 38959 GTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTT 39018
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||||| || || || || | | ||| || || || |||||
Sbjct 39019 GTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGACTTCCAAAGTGAT 39078
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
||||| || || || || ||
Sbjct 39079 GGTCTTACCGGTTAAGGTCTT 39099
>seq14
Length=1507144
Score = 96.9 bits (106), Expect = 8e-15
Identities = 88/111 (79%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| |||||||||||||| || || ||||| || || || |||||||| |||||||||||
Sbjct 192601 GAAAATTTGACCATCAGTGATGGAAATAACGTTAGTTGGAATATAAGCGGAAACATCACC 192660
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATT 4580
|||| ||||| | ||| ||||| || || | || |||||||| || ||
Sbjct 192661 ACCTTGGGTTTCAATAACTGGTAAAGCAGTCATGGAACCACCACCTAATTT 192711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530924972492
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |