Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq14 632 3e-176 seq1 217 2e-51 >seq14 Length=1507144 Score = 632 bits (700), Expect = 3e-176 Identities = 1503/2258 (67%), Gaps = 45/2258 (2%) Strand=Plus/Plus Query 76821 TAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTG 76880 |||||||||||||| || | |||| ||||| |||||||| |||||| || | || Sbjct 780235 TAGTACATACCAGTCTTCAAACCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTA 780294 Query 76881 GAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCT 76940 | | || | || ||||| ||||| || ||| |||||| ||||||||| | Sbjct 780295 CCCATAGTTGGGGCCATGATGTGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGT 780354 Query 76941 CTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACT 77000 |||||||| ||||| | || || |||||||| | | |||||||| |||||| | | Sbjct 780355 CTATCAGCGGCCATATCAATGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAA 780414 Query 77001 TGTTTGATATCATCTGGAAGGTTTGT--ATT-TTGAATGGAACCACCATCTGATATAATT 77057 | || || || | |||| ||||| ||| ||| || |||||| | | || || Sbjct 780415 TCCTTCATTTCTTGAGGAATGTTTGGCAATTGTTGGATAGAACCATTGTTAGCAATGATA 780474 Query 77058 GTATTCTTTATATCATCATTCCACAATTTCC-TCTCTGTTAAAACTCTAAGGAGATGAGG 77116 || ||| || | |||| ||| ||| || | || |||| | | | | | || Sbjct 780475 TTAGACTTCATGGCTTCATCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGG 780533 Query 77117 ATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGG 77176 || || ||||| |||| ||||| || ||| | || ||| || ||| || |||| Sbjct 780534 GTTGACAATTTGGTATTCACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGG 780593 Query 77177 TTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCAC 77236 ||| | | ||||||||| || |||||||| | ||||||||||||||||||||| || || Sbjct 780594 TTCGAAACATTCATTGTAACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAAC 780653 Query 77237 CAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCA 77296 |||||| ||||| | ||| || | || ||| | || | | |||||||||| Sbjct 780654 CAATAAGGAGTTTCTTAAACCGTGCTTGGCAATCTTAGCCTTCAATTCAGTCCAATCCCA 780713 Query 77297 AAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGA 77356 | | || |||| | ||| | ||||||||||| || || | | ||| || Sbjct 780714 TARGGTAGTTGGAGCAACGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGA 780773 Query 77357 TCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGC 77416 || | || | |||| | |||||| ||||||||| |||| |||||||| || Sbjct 780774 ACCTTCGTAAGAAGCATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGC 780833 Query 77417 TCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAA 77476 ||| |||||| ||||||||||| | | || | || | |||| | ||| || Sbjct 780834 AGCGTGATAAATGGTTTCGAAAATTTGAATGTTCAATTCYTTGGCTTTTTCAGAATCGAA 780893 Query 77477 CGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCT 77536 ||| ||| | ||||| | ||| || || || ||||| || | |||||||||| Sbjct 780894 TGGAACTCTTAACATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCT 780953 Query 77537 ATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTT 77596 |||||| | || || || |||| | || ||| ||||| || |||| |||| Sbjct 780954 GTGTCTCATGTTAGATCTTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGC 781013 Query 77597 ATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATC--AA----- 77649 || | || || ||| || ||| || || | ||||| || || || Sbjct 781014 GTTTAAGTTCTTAGCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCGTAAGTTTG 781073 Query 77650 ---------ATCTTCC---ATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTAC 77697 |||||| | || || || || | || || | ||| |||| |||| Sbjct 781074 AGTCTTTTGATCTTCKGAGACCTTTACAAAGGCTGGT-AAGGCAACAGARGCTAAGTTAC 781132 Query 77698 AAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATT 77757 |||| || || ||| | | | |||| | || || ||||| ||| | ||| Sbjct 781133 AAACAGCAGTTTCCTTATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATT 781192 Query 77758 TGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAA 77817 | || || |||| || | ||| || |||||||| || | ||||| |||| ||| | Sbjct 781193 TAATTGTACCCAAGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGA 781252 Query 77818 ACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTT 77875 | ||||| || ||||| | || | ||| | || | | ||| | ||| | ||| || Sbjct 781253 AAGGAGTACCAGTTTCGGTTTGGGCTTCTAAGATGGCGTACCATA--ACTTTTGAGCCTT 781310 Query 77876 TATCATAGATTTGTATCGCCTCTCTCT--TTCATATTGAGTATATAGCCGTTCAAATTCA 77933 || | ||| || | | | ||| ||| ||||| ||| ||| |||||| ||| Sbjct 781311 GATGGTC--TTTCTACCTCTACCTTCTAGTTCGTATTGGTCATAWAGCTTTTCAAAGTCA 781368 Query 77934 TCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCA 77993 || || || |||| ||| ||||| |||| | || | | || | ||| |||||| Sbjct 781369 TCACCATAAGCATCRCTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCA 781428 Query 77994 TCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGG 78053 | | |||| |||| ||||| || | ||||| ||||||| ||| |||| ||||| Sbjct 781429 TTTGCCTTGACTCTCTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTA 781488 Query 78054 GTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAA 78113 | ||| |||||| || || ||| ||| | | |||| || || | |||||||| Sbjct 781489 GCTCTGATTTCTTCCTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAG 781548 Query 78114 TGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATA 78173 |||||||||||||| || | || | | ||||||| ||| ||||| || ||||| | | Sbjct 781549 TGCCATGGTTCTAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACA 781608 Query 78174 TATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTT 78233 |||||||| ||||| || ||||||| | ||| ||||| | ||| || || || ||||| Sbjct 781609 TATCTGGCAGTGTTGTTGAAAACTCTAACCATAGGAATCAAACCATTGGAAGTACCATTG 781668 Query 78234 GTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCT 78293 || |||| ||| ||| ||| | | | || || |||| || || || || || Sbjct 781669 GTACCAGCAATGTAAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCK 781728 Query 78294 GCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCA 78353 || ||||||| ||| |||| || || || ||||| |||||||| || ||| ||| Sbjct 781729 GCAGTCTTAGAAATTTGAGCACATTCCTTYAAGGTATCATAGATACCGTCAATAGAATCA 781788 Query 78354 TCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAAT 78413 ||| |||| || | ||||| |||||||||| | ||| || ||||| ||| Sbjct 781789 TCCTTCATAGAAATTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAAT 781848 Query 78414 AATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCT 78473 | ||| ||||| ||||| ||||| || ||| ||| | | ||||| ||||| || || Sbjct 781849 AGTGTTGGAGAAGCATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACT 781908 Query 78474 GATTCTATG-TCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCT 78532 ||| ||| | || | || || || || || || | ||| | || ||| || ||||| Sbjct 781909 TTTTCAATGTTTTCACCG-TGGATACCAACAGCAACTCTCATRATCAAATGTTGTGGTCT 781967 Query 78533 TTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAA 78592 |||||| ||||| ||| || ||||| ||||||||| ||||||| || || |||||||| Sbjct 781968 TTCAACGATCTTACCATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAA 782027 Query 78593 ATAGTTGTA--TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTAT 78650 ||||||||| ||||| ||||| || | |||||| || || || ||||||||| | Sbjct 782028 ATAGTTGTAGTTGAAA--TCTCTATCRAAGATAATAGTAGCATCTAAGGTATCTTTGTGT 782085 Query 78651 TTGGTAACAATATCCATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGA 78710 || |||| | | ||| | ||||| || ||||| ||||||||| | Sbjct 782086 TTCATAACGGTTTTATAAACATCATCAGAAATCATTGGAGACAAAACACCATTTCTTTCG 782145 Query 78711 TTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGT 78770 ||||| ||||| |||| ||||| || || | | ||||| |||||| |||| ||||||| Sbjct 782146 TTAACGTAGTTGTATAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGT 782205 Query 78771 AGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAA 78830 | ||| | || ||||| || || |||| ||||||||||||||| || || || Sbjct 782206 AAGTTACTGATGGCAATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CAT 782264 Query 78831 GT-GGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAG 78889 || ||| |||| || ||||| ||||||| || || || || || || | || | Sbjct 782265 GTAGGCACAAGTTTCAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGAC 782324 Query 78890 TCCTTGAATAACTTTCATGGCGATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATA 78949 || |||| | | || ||||||||||||||| | | | || | |||||||| Sbjct 782325 ACCGGAGATAATTCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATA 782384 Query 78950 ACATAATTTTCTAATACGAGATGTGATTTTATCAAATATAACATTCTCCTTGCATCCATT 79009 |||||| | ||| | ||||| |||||||||||| ||| | || | ||| | Sbjct 782385 GCATAATCTAGCAATTCTGGATGTAATTTTATCAAATTGAACTGGAACTTTTCTTCCGTC 782444 Query 79010 TCGTTTAATAACGAACATCGTTTGGTATAATAGAAATT 79047 || ||||| ||| ||||| ||| ||||| ||| ||| Sbjct 782445 TCTTTTAACAACAAACAT-GTT---TATAAAAGATATT 782478 >seq1 Length=1289090 Score = 217 bits (240), Expect = 2e-51 Identities = 408/599 (68%), Gaps = 6/599 (1%) Strand=Plus/Minus Query 48132 AACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAA 48191 |||| || ||| ||||| ||| ||| | |||||||||||||| || |||||||| || Sbjct 688255 AACAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAG 688196 Query 48192 AATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCA 48251 || || | ||| ||||| | || ||| || | ||| || || || || || || ||| Sbjct 688195 AAAGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCA 688136 Query 48252 GAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCG 48311 || || || | ||||| || || ||||| || ||||| || | | || || Sbjct 688135 GAGAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCC 688076 Query 48312 TTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCT 48368 || | | ||||| | ||||| |||||||| | ||| | ||| || |||||| Sbjct 688075 TTATCTTGAATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCT 688016 Query 48369 ATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGA 48428 ||||| || || | || | ||||| || ||| || | ||| || |||| ||| | | Sbjct 688015 ATAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAA 687956 Query 48429 CTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCT 48488 ||| |||| |||||||| ||||| || || || || ||||| ||||| | ||| Sbjct 687955 GAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCT 687896 Query 48489 TCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCA 48548 |||| || || || || | | | || |||| |||| || ||||| || || |||||| Sbjct 687895 TCTGGAATTTGAACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCA 687836 Query 48549 CTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGT--- 48605 ||||||||| || || || || | ||| ||| || |||| || | ||| | Sbjct 687835 GAAGCAGCAAAGAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTG 687776 Query 48606 TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCC 48665 |||||||| || | | ||| || || | ||| | ||||||||| ||||| || || || Sbjct 687775 TTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCT 687716 Query 48666 TCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCT 48724 || ||| | ||||| | ||| || || | ||| ||||||||| | ||| ||||| Sbjct 687715 TCGGCTCTCTTATAGGCTTCCCAAATTTCTGGGAATTTGATTGGGAATAAAACGAATCT 687657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668643699520