Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq14 538 5e-148 seq1 235 8e-57 >seq14 Length=1507144 Score = 538 bits (596), Expect = 5e-148 Identities = 1473/2239 (66%), Gaps = 49/2239 (2%) Strand=Plus/Plus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 ||||| ||||| | | || || | || ||| | | |||||||||||||| || | | Sbjct 780196 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 780255 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 ||| ||||| |||||||| |||||| |||| || | | || | || Sbjct 780256 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATAGTTGGGGCCATGATG 780315 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 ||||| ||||| || ||| |||||| ||||||||| ||||||||| ||||| | || Sbjct 780316 TGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCGGCCATATCAATG 780375 Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA 75616 || |||||||| | | |||||||| |||||| | | | || || || | |||| Sbjct 780376 ATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATCCTTCATTTCTTGAGGAATG 780435 Query 75617 TTTGT--ATT-TTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673 |||| ||| ||| || || || | || || || || ||| || | |||| | Sbjct 780436 TTTGGCAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTCATCC 780495 Query 75674 CACAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCC 75732 || ||| | | || |||| | | | | | || || |||||||| |||| || Sbjct 780496 CA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTCACC 780554 Query 75733 AGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCC 75792 ||| || ||||| || ||| || ||| || ||||||| | | ||||||||| || Sbjct 780555 AGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCGAAACATTCATTGTAACC 780614 Query 75793 CAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACC 75852 |||||||| | ||| |||||||| |||||||| || |||||||| ||||| | ||| Sbjct 780615 TAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAAACC 780674 Query 75853 ATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATC 75912 || | || ||| | || | | |||||||||| | | ||| |||| | Sbjct 780675 GTGCTTGGCAATCTTAGCCTTCAATTCAGTCCAATCCCATARGGTAGTTGGAGCAACGTT 780734 Query 75913 CCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGT 75972 ||||| ||||||||||| || || | ||| || || | || | | || || Sbjct 780735 CCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCATAGGT 780794 Query 75973 CCCGTCCTTTTCAGCTAGTTC---GCAACTCGCCTCTAACGCACCGTAATAAATTGTTTC 76029 || || ||||||||| ||| | || || || || ||| ||| |||||| ||||| Sbjct 780795 TCCTTCAATTTCAGCTAATTCAGTGGAA---GCTTCCAAAGCAGCGTGATAAATGGTTTC 780851 Query 76030 GAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAAT 76089 |||||| | | || | || | |||| | ||| || ||| ||| | || Sbjct 780852 GAAAATTTGAATGTTCAATTCYTTGGCTTTTTCAGAATCGAATGGAACTCTTAACATCAT 780911 Query 76090 AAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAAT 76149 ||| | ||| || | || ||||| || | |||||||||| |||||| | || || | Sbjct 780912 AAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTTAGATCT 780971 Query 76150 TTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGA-CAA 76208 | ||| | || ||||||||| || | || |||| || | | |||| | ||| Sbjct 780972 TCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTA-AGTTCTTAGCAA 781030 Query 76209 CTACTTTAACCACGTCCTTTAGTTTGAGAAAATCA-AATTTTCCATCT----ATC----- 76258 || ||| || || | ||||| || || || ||| ||| ||| Sbjct 781031 TAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCGTAAGTTTGAGTCTTTTGATCTTCKG 781090 Query 76259 --------ACAAACA-TATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTA 76309 ||||| | |||| || | ||| |||| |||||||| || || ||| Sbjct 781091 AGACCTTTACAAAGGCTGGTAAG-GCAACAGARGCTAAGTTACAAACAGCAGTTTCCTTA 781149 Query 76310 GCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTT 76369 ||| | |||| | || || |||| ||| | | || || || || | || Sbjct 781150 TCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCCAAGTTC 781209 Query 76370 TGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCA 76429 | ||| || ||||| ||||| | ||||| |||| || || ||||| |||||||| Sbjct 781210 TTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACCAGTTTCG 781269 Query 76430 ATCTGTGATTCGATAATAGATTTCCAGACGACTCT--AGCTTTTATTATAGATTTGTATC 76487 | || | ||| | || | | ||| | ||| | ||| || || | ||| || | Sbjct 781270 GTTTGGGCTTCTAAGATGGCGTACCATA--ACTTTTGAGCCTTGATGGTC--TTTCTACC 781325 Query 76488 GCTTCTCTCT--TTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATC 76545 || | ||| ||| ||||| ||| | | |||||| ||||| || || |||| Sbjct 781326 TCTACCTTCTAGTTCGTATTGGTCATAWAGCTTTTCAAAGTCATCACCATAAGCATCRCT 781385 Query 76546 CAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTT 76605 |||||||||| |||| | ||| | | || | ||| ||||||| | |||| || | || Sbjct 781386 CAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCTCTT 781445 Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATT 76665 ||| || | ||||| ||||||| ||| |||| ||||| | ||| |||||| || Sbjct 781446 CATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTT 781505 Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725 || ||| ||| | | || | ||| || | |||||||| |||||||||||||| || Sbjct 781506 ACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAGGTA 781565 Query 76726 TATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATT 76785 | || | |||| |||| ||| ||||| || ||||| | ||||||||||||||| || Sbjct 781566 CAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATATCTGGCAGTGTTGTT 781625 Query 76786 ATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACT 76845 ||||||| | ||| ||||| | || || || |||||||| || |||| ||| ||| Sbjct 781626 GAAAACTCTAACCATAGGAATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTAAGA 781685 Query 76846 TCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAG 76905 ||| | | || || ||| || || || || || || | ||||| ||| | Sbjct 781686 GCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCKGCAGTCTTAGAAATTTG 781745 Query 76906 AGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAG 76965 |||||| || || || |||||||| || || ||| ||||||| |||| || | Sbjct 781746 AGCACATTCCTTYAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAAATTAA 781805 Query 76966 AAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATG 77025 ||||| |||||||||| | ||| || ||||| || | ||| ||||| ||||| Sbjct 781806 GAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGCATG 781865 Query 77026 AGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTAT-ATCCCATT 77084 || || || ||| ||| | | ||||| ||||| || ||| ||| || | || Sbjct 781866 GGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTTCACC 781925 Query 77085 GATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTAT 77144 | || || || ||||| || | ||| | || ||| || |||| ||| || ||||| || Sbjct 781926 G-TGGATACCAACAGCAACTCTCATRATCAAATGTTGTGGTCTTTCAACGATCTTACCAT 781984 Query 77145 TTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAA 77202 | || ||||| ||||||||| ||||||| || || ||||||||||||||||| ||||| Sbjct 781985 TGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGAAA- 782043 Query 77203 GTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCAT 77262 ||||| || | |||||| | || || | || || | ||| |||| | | Sbjct 782044 -TCTCTATCRAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTTTATA 782102 Query 77263 GACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAA 77322 ||| |||||| |||||||| | |||||| | ||||| ||||| |||| Sbjct 782103 AACATCATCAGAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGTAGTTGTATAA 782162 Query 77323 GTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTAT 77382 |||||| || || | ||||| |||||| |||| |||||||| || | ||| || Sbjct 782163 GTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACTGATGGCAAT 782222 Query 77383 TCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGT-GGCTGCTATTTCTG 77441 ||| || || |||| ||||| |||||||| || || || || ||| |||| | Sbjct 782223 TCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGGCACAAGTTTCAG 782281 Query 77442 CCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCA 77501 | ||||| |||||||||| || |||||||| || | || | || |||| | | Sbjct 782282 CGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGGAGATAATTCTTT 782341 Query 77502 TGGCTATTTTGATAGGATCTACAAACTCGGTGTTCAAACCATAACATAATTTTCTAATAC 77561 || ||||||| |||||| | | | | | || ||||| |||||| | ||| | Sbjct 782342 GGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCATAATCTAGCAATTC 782401 Query 77562 GAGATGTGATTTTATCAAA 77580 ||||| ||||||||||| Sbjct 782402 TGGATGTAATTTTATCAAA 782420 >seq1 Length=1289090 Score = 235 bits (260), Expect = 8e-57 Identities = 412/599 (69%), Gaps = 6/599 (1%) Strand=Plus/Minus Query 46621 AACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAA 46680 |||| || ||| ||||| ||| ||| | ||||||||||||| || |||||||| || Sbjct 688255 AACAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAG 688196 Query 46681 AATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCA 46740 || || | |||||||| | || || || | ||| || ||||| || || || ||| Sbjct 688195 AAAGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCA 688136 Query 46741 GAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCA 46800 || || || | ||||| ||||| || || || || ||||| || | | || || Sbjct 688135 GAGAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCC 688076 Query 46801 TTAT---GAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCT 46857 |||| ||||||| || |||||| |||||||||| ||| | ||| || |||||| Sbjct 688075 TTATCTTGAATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCT 688016 Query 46858 ATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGA 46917 ||||| || || | || | ||||| | ||| || | ||||| |||| ||| | | Sbjct 688015 ATAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAA 687956 Query 46918 CTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCT 46977 ||| |||| || ||||||||||| || || || || ||||| ||||| | ||| Sbjct 687955 GAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCT 687896 Query 46978 TCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCA 47037 || | ||| || || || | | | || |||| ||| || ||||| || || |||||| Sbjct 687895 TCTGGAATTTGAACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCA 687836 Query 47038 CTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGT--- 47094 ||||||||| || ||||| || | ||| ||| || |||||| | ||| | Sbjct 687835 GAAGCAGCAAAGAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTG 687776 Query 47095 TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCC 47154 |||||||| || | | ||| || || | ||| | ||||||||| |||||||| || || Sbjct 687775 TTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCT 687716 Query 47155 TCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCT 47213 || ||| | ||||| | ||| || || | ||| ||| || || | ||| ||||| Sbjct 687715 TCGGCTCTCTTATAGGCTTCCCAAATTTCTGGGAATTTGATTGGGAATAAAACGAATCT 687657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934239589760