Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1 275 7e-69 >seq1 Length=1289090 Score = 275 bits (304), Expect = 7e-69 Identities = 604/897 (67%), Gaps = 11/897 (1%) Strand=Plus/Minus Query 23206 ATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCT 23265 |||||||| |||||||| || ||| | |||| || ||||| |||||||| || Sbjct 688549 ATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCT 688490 Query 23266 AATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA- 23324 || ||||| ||||||||||| || ||||| || | ||| | ||||||| | | | Sbjct 688489 AAGGATATGTTTTCCATAAAGTCGAATGGGTTGGTGACATTGAA--CAGCTTTTCGTTAC 688432 Query 23325 -TAATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGT 23383 ||| | ||| | ||||| || |||||||||| |||||| ||| | |||| | Sbjct 688431 CTAAGGCAACTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCAT 688372 Query 23384 TTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAG 23443 | ||||| | || | |||||||| |||||| ||| || |||||||| ||||| Sbjct 688371 TCATACCAAGTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAG 688312 Query 23444 CATCTTTAATTATTTGAACAATAACTTCTTCA-CTAGGTGGATATTTTAAATACTTAAAC 23502 | || ||| ||| |||| | | | | || | | | | ||| || | ||| Sbjct 688311 CTTCAGCAATAATTCTTTCAATGATCTTTGGATCTGGCTTGTTCTTT-AAGTGRGAGAAC 688253 Query 23503 AATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAAT 23562 |||| ||| ||||| ||| ||||| |||||||| |||| |||||||| || || || Sbjct 688252 AATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAA 688193 Query 23563 GTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAA 23622 || || || ||||| || || ||| || | ||| || || ||||||||||| || || Sbjct 688192 GTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAG 688133 Query 23623 AAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAA 23682 || || | ||| |||||||| ||||| || || || | | | |||| || | | | Sbjct 688132 AAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTA 688073 Query 23683 TCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATT 23742 || ||||||| | | | ||| | |||||| || | ||| ||||| || Sbjct 688072 TCTTGAATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATA 688013 Query 23743 GCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTA 23802 || ||||| | ||| ||||| | ||| | || ||||| || | || |||| | Sbjct 688012 GCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAA 687953 Query 23803 TACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCA 23862 || ||||||| ||||| ||||| || ||| || || || || ||||| ||||||| Sbjct 687952 TAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCT 687893 Query 23863 GACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTA 23922 | | |||||| ||| | | || ||| | | || ||||| || |||||||||||| | Sbjct 687892 GGAATTTGAACTTCAGCAGAGAARTTTTCAACCAAGTTTTCATTGACAATACCATCAGAA 687833 Query 23923 GCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCA---TCAGTTGATAAT-TT 23978 |||||||||||||| | || | || ||| ||||||| ||| || || | || Sbjct 687832 GCAGCAAAGAAAGCCAAKACTCTTGAAATGAAAAATCTTTCATTTTCA-TTCATTCTGTT 687774 Query 23979 TTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAA 24038 |||||||| | | ||| || || ||||| | ||| ||| | ||||| ||| || Sbjct 687773 ATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTC 687714 Query 24039 GGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATCT 24095 ||| | |||||| | |||||| || || ||||| |||| |||||||| Sbjct 687713 GGCTCTCTTATAGGCTTCCCAAATTTCTGGGAATTTGATTGGGAATAAAACGAATCT 687657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521487882665200