Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq12 125 1e-23 >seq12 Length=1055690 Score = 125 bits (138), Expect = 1e-23 Identities = 318/477 (67%), Gaps = 26/477 (5%) Strand=Plus/Plus Query 50443 TAGATCGTTTAGGATTTAATTACAGAAACAAAGGAGATTTAGGACCTGTTTACGGTTTTC 50502 ||||| | | || || | | ||||| | |||| |||||||| |||||||| ||||| | Sbjct 820209 TAGATTCTCTTGGGTTAACTGACAGAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCC 820268 Query 50503 AATGGAGACATTTTGGAGCGCGTTACATAAATTGCGACGTAAATTACGAAGGTCAAGGCG 50562 |||||||||||||||| || || | |||| || | ||| | |||| Sbjct 820269 AATGGAGACATTTTGGTGCTGAATATGTTGATTGTCACACTGACTACACAAACAAAGGAT 820328 Query 50563 TGGATCAACT--GCAAAA-AATT-ATAACGACGTTGAAAACAAACCCCGACGATCGGCGT 50618 |||||| | || | | |||| |||| |||||| || || || ||||| | | Sbjct 820329 ACGATCAATTAAGCGATATAATTCATAA----GTTGAAGACCAATCCTTACGATAGAAGA 820384 Query 50619 ATTTTAATGACCGCCTGGAATCCAACCGATATAGATCAAACCGTTTTACCTCCGTGTCAT 50678 || | ||| | || ||||||||| | || | | ||| | | | || || || || Sbjct 820385 ATCATCATGTCTGCTTGGAATCCACCAGACTTTAAGAAAATGGCTCTTCCGCCATGCCAC 820444 Query 50679 GTTTTATGTCAATTTTATG---------CCACAGAC--AATGTTTTATCCTGTCA---AT 50724 ||||| |||||||| |||| | | |||| || | | | ||||| || Sbjct 820445 GTTTTCTGTCAATTCTATGTTTCTTTCCCTAAAGACCAAAAGCCTCAAT-TGTCATGTAT 820503 Query 50725 GTTAT--CAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGC 50782 |||| |||||||| ||||||||| || || |||||||||||| | |||||||| || Sbjct 820504 CTTATACCAAAGATCTTGTGATATGGGGTTGGGTGTTCCTTTCAACATTGCTTCTTATGC 820563 Query 50783 TTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAATTTATTCATAC 50842 ||| || || |||| || | | || |||||| | || ||||||||||| || Sbjct 820564 TTTGTTGACCAGAATGATTGCAAAGGTTGTTGATATGGATTGTGGTGAATTTATTCACAC 820623 Query 50843 GTTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAGCAA-TTGA 50898 | || || ||||| ||||| || || || |||||||| || || ||| |||| Sbjct 820624 CATGGGTGATGCTCACGTTTACAAGGAYCATGTAGATGCTTTRAAAGAACAAMTTGA 820680 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/158 (73%), Gaps = 2/158 (1%) Strand=Plus/Minus Query 63725 TAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACA-GCT 63783 ||| | ||||| | ||||| | ||| |||| ||||| |||||||||||| ||| | | Sbjct 609931 TAAGAGTAAGAACCACTAAAGTTCCACAAATTGGTGACAAATTTGCTTCTAG-ACATGGT 609873 Query 63784 CAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGT 63843 ||||| ||||| |||||| | || || |||||||||||| || || || ||| Sbjct 609872 CAAAAGGGTACAATTGGTATTACCTACAGAAGAGAAGATATGCCGTTCACTGCTGAAGGT 609813 Query 63844 ATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCC 63881 || || || ||| | | |||||||| || ||| |||| Sbjct 609812 ATTGTGCCTGATTTGATTATCAATCCCCATGCTATTCC 609775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667075049908080