Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq12 125 1e-23
>seq12
Length=1055690
Score = 125 bits (138), Expect = 1e-23
Identities = 318/477 (67%), Gaps = 26/477 (5%)
Strand=Plus/Plus
Query 50443 TAGATCGTTTAGGATTTAATTACAGAAACAAAGGAGATTTAGGACCTGTTTACGGTTTTC 50502
||||| | | || || | | ||||| | |||| |||||||| |||||||| ||||| |
Sbjct 820209 TAGATTCTCTTGGGTTAACTGACAGAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCC 820268
Query 50503 AATGGAGACATTTTGGAGCGCGTTACATAAATTGCGACGTAAATTACGAAGGTCAAGGCG 50562
|||||||||||||||| || || | |||| || | ||| | ||||
Sbjct 820269 AATGGAGACATTTTGGTGCTGAATATGTTGATTGTCACACTGACTACACAAACAAAGGAT 820328
Query 50563 TGGATCAACT--GCAAAA-AATT-ATAACGACGTTGAAAACAAACCCCGACGATCGGCGT 50618
|||||| | || | | |||| |||| |||||| || || || ||||| | |
Sbjct 820329 ACGATCAATTAAGCGATATAATTCATAA----GTTGAAGACCAATCCTTACGATAGAAGA 820384
Query 50619 ATTTTAATGACCGCCTGGAATCCAACCGATATAGATCAAACCGTTTTACCTCCGTGTCAT 50678
|| | ||| | || ||||||||| | || | | ||| | | | || || || ||
Sbjct 820385 ATCATCATGTCTGCTTGGAATCCACCAGACTTTAAGAAAATGGCTCTTCCGCCATGCCAC 820444
Query 50679 GTTTTATGTCAATTTTATG---------CCACAGAC--AATGTTTTATCCTGTCA---AT 50724
||||| |||||||| |||| | | |||| || | | | ||||| ||
Sbjct 820445 GTTTTCTGTCAATTCTATGTTTCTTTCCCTAAAGACCAAAAGCCTCAAT-TGTCATGTAT 820503
Query 50725 GTTAT--CAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGC 50782
|||| |||||||| ||||||||| || || |||||||||||| | |||||||| ||
Sbjct 820504 CTTATACCAAAGATCTTGTGATATGGGGTTGGGTGTTCCTTTCAACATTGCTTCTTATGC 820563
Query 50783 TTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAATTTATTCATAC 50842
||| || || |||| || | | || |||||| | || ||||||||||| ||
Sbjct 820564 TTTGTTGACCAGAATGATTGCAAAGGTTGTTGATATGGATTGTGGTGAATTTATTCACAC 820623
Query 50843 GTTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAGCAA-TTGA 50898
| || || ||||| ||||| || || || |||||||| || || ||| ||||
Sbjct 820624 CATGGGTGATGCTCACGTTTACAAGGAYCATGTAGATGCTTTRAAAGAACAAMTTGA 820680
Score = 84.2 bits (92), Expect = 3e-11
Identities = 115/158 (73%), Gaps = 2/158 (1%)
Strand=Plus/Minus
Query 63725 TAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTTACA-GCT 63783
||| | ||||| | ||||| | ||| |||| ||||| |||||||||||| ||| | |
Sbjct 609931 TAAGAGTAAGAACCACTAAAGTTCCACAAATTGGTGACAAATTTGCTTCTAG-ACATGGT 609873
Query 63784 CAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGT 63843
||||| ||||| |||||| | || || |||||||||||| || || || |||
Sbjct 609872 CAAAAGGGTACAATTGGTATTACCTACAGAAGAGAAGATATGCCGTTCACTGCTGAAGGT 609813
Query 63844 ATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCC 63881
|| || || ||| | | |||||||| || ||| ||||
Sbjct 609812 ATTGTGCCTGATTTGATTATCAATCCCCATGCTATTCC 609775
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 667075049908080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |