Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq18 107 5e-18 seq16 102 2e-16 >seq18 Length=436904 Score = 107 bits (118), Expect = 5e-18 Identities = 146/203 (72%), Gaps = 3/203 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||||||||| |||||||| || || || || || || | ||||| ||| Sbjct 25385 AAAATGC---AAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAA 25441 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 || || | ||||| || || || || || || ||||||||||| || || || Sbjct 25442 TCTTCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCT 25501 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || || ||| || | |||||||| || || || | |||||||| || ||| | | || Sbjct 25502 GATCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGAC 25561 Query 178095 TATAACGTCCAAAAAGAATCAAC 178117 || ||| | ||||||||||| || Sbjct 25562 TACAACATTCAAAAAGAATCCAC 25584 >seq16 Length=726111 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || |||||| | || || || || ||||| | || || ||| ||| Sbjct 202343 CAAATCTTTGTTAAAACTTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTAGTGAC 202402 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 | ||||| |||||| || || || || || ||||| || ||||| || || ||| Sbjct 202403 TCTATCGACGCTGTCAAATCTAAAATCCAAGATAAGGAAGGTATTCCTCCTGATCAACAA 202462 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || |||||||| ||||| | |||||||| || || | | ||||| ||| | Sbjct 202463 AGATTGATTTTCGCCGGTAAACAATTAGAAGATGGTAGAACATTATCTGATTACAACATT 202522 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| || || ||||| || || ||| | ||| Sbjct 202523 CAAAAAGAATCCACTCTCCATCTAGTCTTAAGATTAAGA 202561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730922389492