Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq18 107 5e-18
seq16 102 2e-16
>seq18
Length=436904
Score = 107 bits (118), Expect = 5e-18
Identities = 146/203 (72%), Gaps = 3/203 (1%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| |||||||||| |||||||| || || || || || || | ||||| |||
Sbjct 25385 AAAATGC---AAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAA 25441
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
|| || | ||||| || || || || || || ||||||||||| || || ||
Sbjct 25442 TCTTCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCT 25501
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| || ||| || | |||||||| || || || | |||||||| || ||| | | ||
Sbjct 25502 GATCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGAC 25561
Query 178095 TATAACGTCCAAAAAGAATCAAC 178117
|| ||| | ||||||||||| ||
Sbjct 25562 TACAACATTCAAAAAGAATCCAC 25584
>seq16
Length=726111
Score = 102 bits (112), Expect = 2e-16
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || |||||| | || || || || ||||| | || || ||| |||
Sbjct 202343 CAAATCTTTGTTAAAACTTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTAGTGAC 202402
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
| ||||| |||||| || || || || || ||||| || ||||| || || |||
Sbjct 202403 TCTATCGACGCTGTCAAATCTAAAATCCAAGATAAGGAAGGTATTCCTCCTGATCAACAA 202462
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | || |||||||| ||||| | |||||||| || || | | ||||| ||| |
Sbjct 202463 AGATTGATTTTCGCCGGTAAACAATTAGAAGATGGTAGAACATTATCTGATTACAACATT 202522
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||||||||| || || ||||| || || ||| | |||
Sbjct 202523 CAAAAAGAATCCACTCTCCATCTAGTCTTAAGATTAAGA 202561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730922389492
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |