Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq140 199 4e-46
>seq140
Length=127049
Score = 199 bits (220), Expect = 4e-46
Identities = 612/928 (66%), Gaps = 35/928 (4%)
Strand=Plus/Plus
Query 16642 TGTGTTATCTTGTTTATGA-ACAACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGA 16700
||| ||| |||| || || | |||||| | |||| ||||| ||| | |||||| |
Sbjct 6220 TGTATTA-CTTGATTTTGCCATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAA 6278
Query 16701 AAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTAGTAGC-T 16759
| || || ||||| || ||| || ||||| ||||| |||||||| ||||| | | | |
Sbjct 6279 AGAAATTGGTTTTACCTGCTAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACAT 6338
Query 16760 GAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATAT 16819
| |||||||| | |||| | | | | | ||||||||| || |||||||| | ||||
Sbjct 6339 TATAATATTTTTCATTACCTAA-TGCAACCAATAATCTATCAGCAACAAATTCAACATAT 6397
Query 16820 TGGCACATTAATTC-GCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAA- 16877
|| ||| ||| | ||| ||||| |||| | | || || | || || ||||||
Sbjct 6398 TGATTCATCAATGCAGCA-TTCATACCTAATAAAGAAACAGGCAATGCATCT-TCAAAAT 6455
Query 16878 ATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGGAC--GG 16935
||| || || ||| ||| ||||| ||||||| || || | || | ||| ||
Sbjct 6456 ATCTTTTTTCAATAGAAACAGCTTCAGTAATAATTCTTTCAGCGATTT--TTGGATCTGG 6513
Query 16936 TGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCT 16995
| ||| || | ||||| ||| | |||||||| ||||| |||| || || |||||
Sbjct 6514 TTTATTTTCCAAATGTTGAAATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCT 6573
Query 16996 GCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAA 17055
| || | ||| || ||||| ||||| || |||||| || |||||||||||||||
Sbjct 6574 ACAAATCAATTCATTTGAAAAAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAA 6633
Query 17056 TATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCG 17115
|| || || || || || |||||||| | ||| || || | ||||| || | ||||
Sbjct 6634 AATTGCAGCAAATGAACCGGAAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCT 6693
Query 17116 TTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTT----TTT 17171
||| || | || |||| | |||||||| | |||| || |||| |||
Sbjct 6694 TTCAGCAAATAATGCATCTTCATCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTT 6753
Query 17172 GCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGA 17231
| ||| || | || ||||| || || || || || || |||| | | | ||
Sbjct 6754 GATTTGTGGA----ATAGTTTCAATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTT 6809
Query 17232 TTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCT 17291
| ||||| |||||||| | || || |||| || || || ||||| || |
Sbjct 6810 TGATATAAGTATCGATCAAAAGCGAATATGTTTCACTATGGATATTTTCCATCATGATTT 6869
Query 17292 GAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC--CACGTAGAATCGTTCCGC 17349
| || |||||||| ||| ||||| | || || ||||| ||| | | || ||| |
Sbjct 6870 GGAACCCGTAAAAACATTTAGCTTCTGGAATCTGCACTTCAGCACTGAAATTC--TCCAC 6927
Query 17350 TAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATA-TATGCTTAATGA 17408
| ||| || || || || || || || |||||||| || || | | | | ||||||
Sbjct 6928 CAAATTCTCATTGACAATCCCATCTGAAGCAGCGAAAAATGCTAAAACTCTAC-TAATGA 6986
Query 17409 AATAT------TTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATAT 17462
|| || ||||| | | | || | |||||| | | ||||||||| | ||
Sbjct 6987 AAAATCTTTCATTTTCATTCATTCTATTA---TTCCAGTCGTGGATATCTTTGGAAAGAT 7043
Query 17463 CCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCAT 17522
| | |||||| | |||||||| ||| | || ||| || | ||| || ||||
Sbjct 7044 CGATTTCTTCTGCAGTCCAAAATGAAGCTTCAGCACGTTTGTAAGCTTGCCAGATTTCAT 7103
Query 17523 TGTATTGTATGGGGAATACAACATATCT 17550
||||| || || || | |||| ||||
Sbjct 7104 GGTATTTGATTGGAAACAAAACAAATCT 7131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517543626857400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |