Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq140 199 4e-46 >seq140 Length=127049 Score = 199 bits (220), Expect = 4e-46 Identities = 612/928 (66%), Gaps = 35/928 (4%) Strand=Plus/Plus Query 16642 TGTGTTATCTTGTTTATGA-ACAACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGA 16700 ||| ||| |||| || || | |||||| | |||| ||||| ||| | |||||| | Sbjct 6220 TGTATTA-CTTGATTTTGCCATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAA 6278 Query 16701 AAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTAGTAGC-T 16759 | || || ||||| || ||| || ||||| ||||| |||||||| ||||| | | | | Sbjct 6279 AGAAATTGGTTTTACCTGCTAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACAT 6338 Query 16760 GAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATAT 16819 | |||||||| | |||| | | | | | ||||||||| || |||||||| | |||| Sbjct 6339 TATAATATTTTTCATTACCTAA-TGCAACCAATAATCTATCAGCAACAAATTCAACATAT 6397 Query 16820 TGGCACATTAATTC-GCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAA- 16877 || ||| ||| | ||| ||||| |||| | | || || | || || |||||| Sbjct 6398 TGATTCATCAATGCAGCA-TTCATACCTAATAAAGAAACAGGCAATGCATCT-TCAAAAT 6455 Query 16878 ATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGGAC--GG 16935 ||| || || ||| ||| ||||| ||||||| || || | || | ||| || Sbjct 6456 ATCTTTTTTCAATAGAAACAGCTTCAGTAATAATTCTTTCAGCGATTT--TTGGATCTGG 6513 Query 16936 TGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCT 16995 | ||| || | ||||| ||| | |||||||| ||||| |||| || || ||||| Sbjct 6514 TTTATTTTCCAAATGTTGAAATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCT 6573 Query 16996 GCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAA 17055 | || | ||| || ||||| ||||| || |||||| || ||||||||||||||| Sbjct 6574 ACAAATCAATTCATTTGAAAAAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAA 6633 Query 17056 TATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCG 17115 || || || || || || |||||||| | ||| || || | ||||| || | |||| Sbjct 6634 AATTGCAGCAAATGAACCGGAAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCT 6693 Query 17116 TTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTT----TTT 17171 ||| || | || |||| | |||||||| | |||| || |||| ||| Sbjct 6694 TTCAGCAAATAATGCATCTTCATCTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTT 6753 Query 17172 GCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGA 17231 | ||| || | || ||||| || || || || || || |||| | | | || Sbjct 6754 GATTTGTGGA----ATAGTTTCAATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTT 6809 Query 17232 TTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCT 17291 | ||||| |||||||| | || || |||| || || || ||||| || | Sbjct 6810 TGATATAAGTATCGATCAAAAGCGAATATGTTTCACTATGGATATTTTCCATCATGATTT 6869 Query 17292 GAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC--CACGTAGAATCGTTCCGC 17349 | || |||||||| ||| ||||| | || || ||||| ||| | | || ||| | Sbjct 6870 GGAACCCGTAAAAACATTTAGCTTCTGGAATCTGCACTTCAGCACTGAAATTC--TCCAC 6927 Query 17350 TAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATA-TATGCTTAATGA 17408 | ||| || || || || || || || |||||||| || || | | | | |||||| Sbjct 6928 CAAATTCTCATTGACAATCCCATCTGAAGCAGCGAAAAATGCTAAAACTCTAC-TAATGA 6986 Query 17409 AATAT------TTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATAT 17462 || || ||||| | | | || | |||||| | | ||||||||| | || Sbjct 6987 AAAATCTTTCATTTTCATTCATTCTATTA---TTCCAGTCGTGGATATCTTTGGAAAGAT 7043 Query 17463 CCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCAT 17522 | | |||||| | |||||||| ||| | || ||| || | ||| || |||| Sbjct 7044 CGATTTCTTCTGCAGTCCAAAATGAAGCTTCAGCACGTTTGTAAGCTTGCCAGATTTCAT 7103 Query 17523 TGTATTGTATGGGGAATACAACATATCT 17550 ||||| || || || | |||| |||| Sbjct 7104 GGTATTTGATTGGAAACAAAACAAATCT 7131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517543626857400