Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq140 228 8e-55 >seq140 Length=127049 Score = 228 bits (252), Expect = 8e-55 Identities = 592/888 (67%), Gaps = 21/888 (2%) Strand=Plus/Plus Query 15901 AACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAA 15960 |||||| | |||| |||||| ||| | |||||| ||||| || ||||| || |||| Sbjct 6241 AACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCTAA 6300 Query 15961 AGATATATTTTCCATAAAATCAAAGGGATTAGTAGC-TGAAAATATCTTAGAGTACCCCA 16019 || |||||||||||||||||||| ||||| | | | | | ||||| || | |||| | Sbjct 6301 TGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACCTAA 6360 Query 16020 GTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAA 16079 | | | ||||||||| || |||||||| | ||||||| ||| || | ||| | Sbjct 6361 -TGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATTCA 6419 Query 16080 TTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTT 16139 | |||| | || || | || | | ||| || || ||| || ||| |||| Sbjct 6420 TACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAGCTT 6479 Query 16140 CTTTAATGATATCGGTG-GCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATT 16198 | |||| || || | || | || | ||| ||| | | |||| ||| | | Sbjct 6480 CAGTAATAAT-TCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATAAT 6538 Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 ||||| || || || ||||| ||||| ||||| | || | ||| || |||||||| Sbjct 6539 AGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTC 6598 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 || |||||||| || |||||||||||| || || ||||||||||| || |||||| Sbjct 6599 AAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAAAG 6658 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378 || | ||| ||||||| ||||| || | |||| ||| || | ||||||| || Sbjct 6659 AAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCATCT 6718 Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438 |||||||| | ||||||| ||||||| ||| || || ||||| || || Sbjct 6719 TGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAGCA 6778 Query 16439 TTAAACA--ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTG- 16495 || |||| | ||| |||| | || ||| | ||||| ||||| |||| ||| | Sbjct 6779 TTGAACAAGAATTCACTTTCTTTTG--GATCTTTGATATAAGTATCGATCA--AAAGCGA 6834 Query 16496 -TACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554 || |||| || || || || || || || || || || || ||| ||| || Sbjct 6835 ATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTC 6894 Query 16555 CGCTATTTGTACTTC--CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCA 16612 | || || ||||| ||| ||| || ||| ||| |||||||| || || || || Sbjct 6895 TGGAATCTGCACTTCAGCACTGAAATTC--TCCACCAAATTCTCATTGACAATCCCATCT 6952 Query 16613 CTTGCAGCAAAAAACGCCAATA-TGTGCTTAATGAAATATTTTTC---GTCAGATGTAAG 16668 ||||| ||||| || || | | | | |||||||| || |||| ||| | Sbjct 6953 GAAGCAGCGAAAAATGCTAAAACTCTAC-TAATGAAAAATCTTTCATTTTCATTCATTCT 7011 Query 16669 AATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGC 16728 | ||| ||| || | | ||||||||| | ||| | |||||||| |||||||| ||| Sbjct 7012 ATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGC 7071 Query 16729 CACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776 | || ||| || || ||| || |||| ||||| || ||||| Sbjct 7072 TTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAA 7119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511412450232600