Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq140 228 8e-55
>seq140
Length=127049
Score = 228 bits (252), Expect = 8e-55
Identities = 592/888 (67%), Gaps = 21/888 (2%)
Strand=Plus/Plus
Query 15901 AACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAA 15960
|||||| | |||| |||||| ||| | |||||| ||||| || ||||| || ||||
Sbjct 6241 AACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCTAA 6300
Query 15961 AGATATATTTTCCATAAAATCAAAGGGATTAGTAGC-TGAAAATATCTTAGAGTACCCCA 16019
|| |||||||||||||||||||| ||||| | | | | | ||||| || | |||| |
Sbjct 6301 TGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACCTAA 6360
Query 16020 GTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAA 16079
| | | ||||||||| || |||||||| | ||||||| ||| || | ||| |
Sbjct 6361 -TGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATTCA 6419
Query 16080 TTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTT 16139
| |||| | || || | || | | ||| || || ||| || ||| ||||
Sbjct 6420 TACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAGCTT 6479
Query 16140 CTTTAATGATATCGGTG-GCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATT 16198
| |||| || || | || | || | ||| ||| | | |||| ||| | |
Sbjct 6480 CAGTAATAAT-TCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATAAT 6538
Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258
||||| || || || ||||| ||||| ||||| | || | ||| || ||||||||
Sbjct 6539 AGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAGTC 6598
Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318
|| |||||||| || |||||||||||| || || ||||||||||| || ||||||
Sbjct 6599 AAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAAAG 6658
Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378
|| | ||| ||||||| ||||| || | |||| ||| || | ||||||| ||
Sbjct 6659 AAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCATCT 6718
Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438
|||||||| | ||||||| ||||||| ||| || || ||||| || ||
Sbjct 6719 TGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAGCA 6778
Query 16439 TTAAACA--ATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTG- 16495
|| |||| | ||| |||| | || ||| | ||||| ||||| |||| ||| |
Sbjct 6779 TTGAACAAGAATTCACTTTCTTTTG--GATCTTTGATATAAGTATCGATCA--AAAGCGA 6834
Query 16496 -TACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTC 16554
|| |||| || || || || || || || || || || || ||| ||| ||
Sbjct 6835 ATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTC 6894
Query 16555 CGCTATTTGTACTTC--CACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCA 16612
| || || ||||| ||| ||| || ||| ||| |||||||| || || || ||
Sbjct 6895 TGGAATCTGCACTTCAGCACTGAAATTC--TCCACCAAATTCTCATTGACAATCCCATCT 6952
Query 16613 CTTGCAGCAAAAAACGCCAATA-TGTGCTTAATGAAATATTTTTC---GTCAGATGTAAG 16668
||||| ||||| || || | | | | |||||||| || |||| ||| |
Sbjct 6953 GAAGCAGCGAAAAATGCTAAAACTCTAC-TAATGAAAAATCTTTCATTTTCATTCATTCT 7011
Query 16669 AATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGC 16728
| ||| ||| || | | ||||||||| | ||| | |||||||| |||||||| |||
Sbjct 7012 ATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGC 7071
Query 16729 CACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAA 16776
| || ||| || || ||| || |||| ||||| || |||||
Sbjct 7072 TTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAA 7119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511412450232600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |