Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq124 159 3e-34 >seq124 Length=28590 Score = 159 bits (176), Expect = 3e-34 Identities = 414/622 (67%), Gaps = 47/622 (8%) Strand=Plus/Plus Query 101677 TTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTC 101736 ||| | ||| |||| ||||||| ||| | |||||| || || | ||| |||||||| || Sbjct 21858 TTTCAAAGCGTCAACGTGATCTTTATAAACGTGAGCGTCCCCCAAAGTGTGGATAAATTC 21917 Query 101737 TCCAGGCACTAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAAT 101796 ||||| | | || | || | |||||||| || || | | |||| || || Sbjct 21918 ACCAGGATCCATATCACAAACTTTGGCAATCATCTTGGTCAACAATGCATAGGATGCGAT 21977 Query 101797 GTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTT 101856 ||| ||||| |||||||| ||||| || |||||||| || || || ||||| || Sbjct 21978 GTTGAATGGAACTCCTAAACCCATGTCGCAGGATCTTTGGTATAGAACGCACGAAAGTTT 22037 Query 101857 T---------CCATC------------ACAGACATAAAATTGACTTAATACATGACAAGG 101895 || || || |||||||||||||| || ||||||||||| Sbjct 22038 AGGACGAGCGCCTTCCTCCTTAGGAAAACTCACATAAAATTGACTGAAGACATGACAAGG 22097 Query 101896 CGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAACATCCTTCTATC 101955 ||||| ||||||| | |||| | ||||||||||| |||| || |||| || Sbjct 22098 TGGCAAAGCCATTTTTTTGAAATCTGGAGGATTCCAAGCAC---TTAAGATAATTCT-TC 22153 Query 101956 TGT----AGGGTT-TGTTT----TTATAGTATCAATCAACTGTTTTAATTGGTCAACTCC 102006 ||| |||||| ||||| ||||| ||| | | | | | ||| || || Sbjct 22154 TGTCGTAAGGGTTATGTTTCAGTTTATA-TATGACTTCAGCG----AGTTGATCGTAGCC 22208 Query 102007 TTCTCCTTTATAATCG-CGCCCAACACCT-TTATATTCTGCTCCGAAATGCCTCCACTGA 102064 | || | ||| | | || | ||| | || ||||||||||| ||||| ||||||||| Sbjct 22209 CTGGCCATCATAGTTGTCGTC--ACATGTCTTGTATTCTGCTCCAAAATGTCTCCACTGA 22266 Query 102065 AATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTAAA 102124 || ||||| ||||| |||||||| ||||| ||||||| || ||||| || || | | Sbjct 22267 AACCCATAAACAGGACCAAGATCACCTTCTCTTCTGTCACTTAAGCCAAGCTTGTCAAGA 22326 Query 102125 AATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC-AGCT-GCTGATAGCTCTTTGC 102182 | ||| || ||||| | |||||||| ||||| ||| ||| | | |||| | Sbjct 22327 TACTCTCTTGACCCATTTCCTTCCCAAATTCTGACGCCTTGCTCGCTCAAA--ACTTTCC 22384 Query 102183 TGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATACTC 102242 || || |||||||||| ||||| | ||| || || | ||| | || ||| Sbjct 22385 CATCGGTGCATCCTCTGATGAACCAAAGCAGCTCCAAAATTATACCCTTGGTGAACACTT 22444 Query 102243 TCTTAGTAGTTAAAAGTGGAAA 102264 |||| || || |||||||| || Sbjct 22445 TCTTGGTGGTCAAAAGTGGGAA 22466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361249857161555