Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq70 105 7e-18
seq182 93.3 4e-14
>seq70
Length=20209
Score = 105 bits (116), Expect = 7e-18
Identities = 164/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745
|||||||||||| || || ||||| | || || ||||||||||| | || || ||| |
Sbjct 19808 AAAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACTTTGGAAGTTGAATC 19749
Query 40746 CACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804
| | |||| | | | |||| ||||| || || | |||||||| || || || | |
Sbjct 19748 CTCAGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCACCTG 19690
Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864
|||| ||| || | || | || || |||||| |||| |||| | || | |||||
Sbjct 19689 ACCAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCGACT 19630
Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916
|||||||||| |||||| | || || || | || ||| | ||||| || ||
Sbjct 19629 ACAACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGG 19578
>seq182
Length=55006
Score = 93.3 bits (102), Expect = 4e-14
Identities = 164/238 (69%), Gaps = 1/238 (0%)
Strand=Plus/Plus
Query 40683 CCGAAAA-ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCG 40741
|||| || |||||||| ||||| ||||| | || || |||||||| ||| | || ||||
Sbjct 1658 CCGACAAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCG 1717
Query 40742 AAGCCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCG 40801
|| || | |||| | | | | | || | ||||| | |||||||| || |||||
Sbjct 1718 AATCCTCTGACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCAC 1777
Query 40802 CGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG 40861
| ||||| ||| || | |||| || || ||||| |||| || | | || | |
Sbjct 1778 CTGACCAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTG 1837
Query 40862 ACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGG 40919
|||||||||| || || || |||| || || | || ||| | ||||| || || ||
Sbjct 1838 ACTACAACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGTGG 1895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515217235726800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |