Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq124 172 4e-38 >seq124 Length=28590 Score = 172 bits (190), Expect = 4e-38 Identities = 346/509 (68%), Gaps = 33/509 (6%) Strand=Plus/Plus Query 97036 TGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATA 97095 || ||| | | ||| |||| ||||| ||||| |||||| || || |||||||| ||| Sbjct 21853 TGTTCTTTCAAAGCGTCAACGTGATCTTTATAAACGTGAGCGTCCCCCAAAGTGTGGATA 21912 Query 97096 AATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTA 97155 ||||| |||||| | | |||| || | ||| ||||| || || | | |||| Sbjct 21913 AATTCACCAGGATCCATATCACAAACTTTGGCAATCATCTTGGTCAACAATGCATAGGAT 21972 Query 97156 GCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAA 97215 || ||||| || || || |||| ||||| || |||||||| |||| || ||| Sbjct 21973 GCGATGTTGAATGGAACTCCTAAACCCATGTCGCAGGATCTTTGGTATAGAACGCACGAA 22032 Query 97216 AGCTTT---------CCATC------------ACACACATAAAACTGACTCAATACATGA 97254 || || || || || ||||||||| ||||| || |||||| Sbjct 22033 AGTTTAGGACGAGCGCCTTCCTCCTTAGGAAAACTCACATAAAATTGACTGAAGACATGA 22092 Query 97255 CAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTT 97314 || || ||||| ||||||||| | |||| ||||||||||| | | |||||| Sbjct 22093 CAAGGTGGCAAAGCCATTTTTTTGAAATCTGGAGGATTCCAAGCACTTAAGATAATTCTT 22152 Query 97315 CTATCGGTTGGGTT-TGT----GTGTATGGTATTAATTATCTGCTTTAATTGATCAACGC 97369 || ||| ||||| ||| || ||| ||| | || | || | |||||| || Sbjct 22153 CTGTCGTAAGGGTTATGTTTCAGTTTATA-TATGACTT--CAGCG--AGTTGATCGTAGC 22207 Query 97370 CTTCTCCACCATAATTGTGCTTA-AGACCTTGATATTCTGCTCCAAAATGCCTCCATTGG 97428 | | ||| |||| |||| | | | |||| ||||||||||||||||| ||||| || Sbjct 22208 CCTGGCCATCATAGTTGTCGTCACATGTCTTG-TATTCTGCTCCAAAATGTCTCCACTGA 22266 Query 97429 AATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAA 97488 || ||||||||||| ||||| || |||||| ||| |||| || |||||||| || | | Sbjct 22267 AACCCATAAACAGGACCAAGATCACCTTCTCTTCTGTCACTTAAGCCAAGCTTGTCAAGA 22326 Query 97489 TAGGACCTAGATCCATTTGCATCCCAAAT 97517 || || || |||||| | |||||||| Sbjct 22327 TACTCTCTTGACCCATTTCCTTCCCAAAT 22355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346782710938850