Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq124 172 4e-38
>seq124
Length=28590
Score = 172 bits (190), Expect = 4e-38
Identities = 346/509 (68%), Gaps = 33/509 (6%)
Strand=Plus/Plus
Query 97036 TGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATA 97095
|| ||| | | ||| |||| ||||| ||||| |||||| || || |||||||| |||
Sbjct 21853 TGTTCTTTCAAAGCGTCAACGTGATCTTTATAAACGTGAGCGTCCCCCAAAGTGTGGATA 21912
Query 97096 AATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTA 97155
||||| |||||| | | |||| || | ||| ||||| || || | | ||||
Sbjct 21913 AATTCACCAGGATCCATATCACAAACTTTGGCAATCATCTTGGTCAACAATGCATAGGAT 21972
Query 97156 GCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAA 97215
|| ||||| || || || |||| ||||| || |||||||| |||| || |||
Sbjct 21973 GCGATGTTGAATGGAACTCCTAAACCCATGTCGCAGGATCTTTGGTATAGAACGCACGAA 22032
Query 97216 AGCTTT---------CCATC------------ACACACATAAAACTGACTCAATACATGA 97254
|| || || || || ||||||||| ||||| || ||||||
Sbjct 22033 AGTTTAGGACGAGCGCCTTCCTCCTTAGGAAAACTCACATAAAATTGACTGAAGACATGA 22092
Query 97255 CAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTT 97314
|| || ||||| ||||||||| | |||| ||||||||||| | | ||||||
Sbjct 22093 CAAGGTGGCAAAGCCATTTTTTTGAAATCTGGAGGATTCCAAGCACTTAAGATAATTCTT 22152
Query 97315 CTATCGGTTGGGTT-TGT----GTGTATGGTATTAATTATCTGCTTTAATTGATCAACGC 97369
|| ||| ||||| ||| || ||| ||| | || | || | |||||| ||
Sbjct 22153 CTGTCGTAAGGGTTATGTTTCAGTTTATA-TATGACTT--CAGCG--AGTTGATCGTAGC 22207
Query 97370 CTTCTCCACCATAATTGTGCTTA-AGACCTTGATATTCTGCTCCAAAATGCCTCCATTGG 97428
| | ||| |||| |||| | | | |||| ||||||||||||||||| ||||| ||
Sbjct 22208 CCTGGCCATCATAGTTGTCGTCACATGTCTTG-TATTCTGCTCCAAAATGTCTCCACTGA 22266
Query 97429 AATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAA 97488
|| ||||||||||| ||||| || |||||| ||| |||| || |||||||| || | |
Sbjct 22267 AACCCATAAACAGGACCAAGATCACCTTCTCTTCTGTCACTTAAGCCAAGCTTGTCAAGA 22326
Query 97489 TAGGACCTAGATCCATTTGCATCCCAAAT 97517
|| || || |||||| | ||||||||
Sbjct 22327 TACTCTCTTGACCCATTTCCTTCCCAAAT 22355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346782710938850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |