Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq182 132 7e-26
seq230 123 4e-23
>seq182
Length=55006
Score = 132 bits (146), Expect = 7e-26
Identities = 171/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || | ||||| ||||| || || | || | ||| | |
Sbjct 1666 ATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCCTCT 1725
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| ||| | ||| ||||| ||||| ||||||||||| |||||||| |||
Sbjct 1726 GACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGACCAA 1785
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || ||||| || |||||||| || ||| || |||| || || || ||
Sbjct 1786 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 1845
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774
|||||||||||||| || | || |||||||| | || |||||||| ||||||
Sbjct 1846 ATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGTGGTAAAAA 1901
>seq230
Length=21327
Score = 123 bits (136), Expect = 4e-23
Identities = 161/223 (72%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 124548 TTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATT 124607
||| | || || |||| || || ||||| ||| |||| | ||| | || || ||
Sbjct 13448 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATC 13507
Query 124608 TCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTT 124667
||| | ||| ||||| ||||| ||||||||||| |||||||| |||||||| |
Sbjct 13508 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 13567
Query 124668 ATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAA 124727
|| ||||| || |||||||| || ||| || |||| || || || || |||||||||
Sbjct 13568 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 13627
Query 124728 GAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770
||||| ||| | || ||||| || | || |||||||| |||
Sbjct 13628 GAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGGTGTTA 13670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755453119824000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |