Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq182 132 7e-26 seq230 123 4e-23 >seq182 Length=55006 Score = 132 bits (146), Expect = 7e-26 Identities = 171/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || || | ||||| ||||| || || | || | ||| | | Sbjct 1666 ATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCCTCT 1725 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| ||||| ||||| ||||||||||| |||||||| ||| Sbjct 1726 GACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGACCAA 1785 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | || ||||| || |||||||| || ||| || |||| || || || || Sbjct 1786 CAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAAC 1845 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 |||||||||||||| || | || |||||||| | || |||||||| |||||| Sbjct 1846 ATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGTGGTAAAAA 1901 >seq230 Length=21327 Score = 123 bits (136), Expect = 4e-23 Identities = 161/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 124548 TTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATT 124607 ||| | || || |||| || || ||||| ||| |||| | ||| | || || || Sbjct 13448 TTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCATC 13507 Query 124608 TCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTT 124667 ||| | ||| ||||| ||||| ||||||||||| |||||||| |||||||| | Sbjct 13508 GATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATTG 13567 Query 124668 ATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAA 124727 || ||||| || |||||||| || ||| || |||| || || || || ||||||||| Sbjct 13568 ATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAAA 13627 Query 124728 GAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 ||||| ||| | || ||||| || | || |||||||| ||| Sbjct 13628 GAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGGTGTTA 13670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755453119824000