Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq182 105 6e-18
seq230 82.4 7e-11
>seq182
Length=55006
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 118521 AATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGC 118580
|||||||| |||||||| | || || ||||||||||||||||| || || ||| |
Sbjct 1883 AATCTCAAAACCAAGTGAAGGGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTA 1824
Query 118581 GTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC 118640
||| || | ||||| ||||| |||| | | || || || || || || || ||
Sbjct 1823 CCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCT 1764
Query 118641 TTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTC 118700
|||||| ||||| |||||| | || | |||||| | | ||||| || | |||
Sbjct 1763 TTGTCTTGGATTTTGGCTTTAACATTGTCAATGGTGTCAGAGGATTCGACTTCCAAGGTA 1704
Query 118701 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| ||||| || |||| |||||| || ||||| |||||
Sbjct 1703 ATGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCAT 1666
>seq230
Length=21327
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118521 AATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGC 118580
|||||||| |||||||| | || || ||||||||||||||||| || || ||| |
Sbjct 13656 AATCTCAAGACCAAGTGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTA 13597
Query 118581 GTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCC 118640
||| || | ||||| ||||| |||| | | || || || || || || || ||
Sbjct 13596 CCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCT 13537
Query 118641 TTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTC 118700
|||||| ||||| ||| || | |||| |||||| | | ||||| || | ||
Sbjct 13536 TTGTCTTGGATTTTGGCTTTGACGTTATCGATGGTGTCGGAGGATTCGACTTCTAGAGTG 13477
Query 118701 ACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730
| || || || || | ||||| ||||||
Sbjct 13476 ATAGTCTTACCAGTTAAGGTTTTGACAAAA 13447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433828787371060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |