Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq140 372 3e-98
>seq140
Length=127049
Score = 372 bits (412), Expect = 3e-98
Identities = 635/902 (70%), Gaps = 19/902 (2%)
Strand=Plus/Plus
Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960
||||| || ||||||||| ||| |||||||||||||||||| || ||||||||| |
Sbjct 6239 ATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCT 6298
Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACAC-TTTATCACAACC 14019
| ||| |||||||||||||||||||||||||||| |||| | | ||| ||| |||
Sbjct 6299 AATGAAATATTTTCCATAAAATCAAATGGATTTGAA-ACATTATAATATTTTTCATTACC 6357
Query 14020 TAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATT 14079
|| | | | | ||||||||| |||| || |||| ||||||| ||| || || |||
Sbjct 6358 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 6417
Query 14080 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAAT-TCTTTTT-CTATAGACACA 14137
|||||||| || ||||| | | || || ||||| ||||||| | ||||| |||
Sbjct 6418 CATACCTAATAAAGAAACAGGCAATGCATC--TTCAAAATATCTTTTTTCAATAGAAACA 6475
Query 14138 GCCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTT--AGATGTTTAA 14195
|| || | ||||| | | |||| || || | |||||| | ||||| ||
Sbjct 6476 GCTTCAGTAATAATTCTTTCAGCGATTT--TTGGATCTGGTTTATTTTCCAAATGTTGAA 6533
Query 14196 AAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAA 14255
| | || ||| ||||||||| || || || |||||||||| ||| | ||| |||||||
Sbjct 6534 ATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAA 6593
Query 14256 ATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGG 14315
| || || ||||||||||| || ||| ||||||||||| |||||||| ||||| ||||
Sbjct 6594 AAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGG 6653
Query 14316 AAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTT 14375
||||||| | || ||||| |||||||| || | |||| ||| |||| |||| | ||
Sbjct 6654 AAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTT 6713
Query 14376 TGT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14434
| | || |||||| | |||||||||||| ||||| ||| || || ||||||
Sbjct 6714 CATCTTGA-ATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCA 6772
Query 14435 ATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 14494
|||||||| || || ||| | ||||| | | | || || ||||| || | |||
Sbjct 6773 ATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCA-AAAG 6831
Query 14495 C-TATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGC 14553
| ||| ||||| || || |||||||| || || || || ||||||||| ||||
Sbjct 6832 CGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGC 6891
Query 14554 TTCTGACCATTGTACCTCTG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCAT 14612
||||| || || || | | | |||| | || ||||||| ||||| || || ||||
Sbjct 6892 TTCTGGAATCTGCACTTCAGCACTGAAAT-TCTCCACCAAATTCTCATTGACAATCCCAT 6950
Query 14613 CACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGCTGA 14669
| ||| || |||||||| || | | |||| ||| | || | | |||||| |
Sbjct 6951 CTGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTC 7010
Query 14670 GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAG 14729
|| ||||| ||| | ||| || |||||||| | ||| || | |||||||| ||
Sbjct 7011 TATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAG 7070
Query 14730 CAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATC 14789
| |||| ||| || | ||| ||||| | ||| || ||||| | |||||||
Sbjct 7071 CTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATC 7130
Query 14790 TT 14791
||
Sbjct 7131 TT 7132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482343761057400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |