Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq140 372 3e-98 >seq140 Length=127049 Score = 372 bits (412), Expect = 3e-98 Identities = 635/902 (70%), Gaps = 19/902 (2%) Strand=Plus/Plus Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960 ||||| || ||||||||| ||| |||||||||||||||||| || ||||||||| | Sbjct 6239 ATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGCT 6298 Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACAC-TTTATCACAACC 14019 | ||| |||||||||||||||||||||||||||| |||| | | ||| ||| ||| Sbjct 6299 AATGAAATATTTTCCATAAAATCAAATGGATTTGAA-ACATTATAATATTTTTCATTACC 6357 Query 14020 TAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATT 14079 || | | | | ||||||||| |||| || |||| ||||||| ||| || || ||| Sbjct 6358 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 6417 Query 14080 CATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAAT-TCTTTTT-CTATAGACACA 14137 |||||||| || ||||| | | || || ||||| ||||||| | ||||| ||| Sbjct 6418 CATACCTAATAAAGAAACAGGCAATGCATC--TTCAAAATATCTTTTTTCAATAGAAACA 6475 Query 14138 GCCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTT--AGATGTTTAA 14195 || || | ||||| | | |||| || || | |||||| | ||||| || Sbjct 6476 GCTTCAGTAATAATTCTTTCAGCGATTT--TTGGATCTGGTTTATTTTCCAAATGTTGAA 6533 Query 14196 AAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAA 14255 | | || ||| ||||||||| || || || |||||||||| ||| | ||| ||||||| Sbjct 6534 ATAATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAA 6593 Query 14256 ATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGG 14315 | || || ||||||||||| || ||| ||||||||||| |||||||| ||||| |||| Sbjct 6594 AAGTCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGG 6653 Query 14316 AAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTT 14375 ||||||| | || ||||| |||||||| || | |||| ||| |||| |||| | || Sbjct 6654 AAAAGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTT 6713 Query 14376 TGT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14434 | | || |||||| | |||||||||||| ||||| ||| || || |||||| Sbjct 6714 CATCTTGA-ATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCA 6772 Query 14435 ATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 14494 |||||||| || || ||| | ||||| | | | || || ||||| || | ||| Sbjct 6773 ATAGCATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCA-AAAG 6831 Query 14495 C-TATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGC 14553 | ||| ||||| || || |||||||| || || || || ||||||||| |||| Sbjct 6832 CGAATATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGC 6891 Query 14554 TTCTGACCATTGTACCTCTG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCAT 14612 ||||| || || || | | | |||| | || ||||||| ||||| || || |||| Sbjct 6892 TTCTGGAATCTGCACTTCAGCACTGAAAT-TCTCCACCAAATTCTCATTGACAATCCCAT 6950 Query 14613 CACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGCTGA 14669 | ||| || |||||||| || | | |||| ||| | || | | |||||| | Sbjct 6951 CTGAAGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTC 7010 Query 14670 GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAG 14729 || ||||| ||| | ||| || |||||||| | ||| || | |||||||| || Sbjct 7011 TATTATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAG 7070 Query 14730 CAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATC 14789 | |||| ||| || | ||| ||||| | ||| || ||||| | ||||||| Sbjct 7071 CTTCAGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATC 7130 Query 14790 TT 14791 || Sbjct 7131 TT 7132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482343761057400