Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq140 141 8e-29
seq182 114 1e-20
seq70 111 1e-19
seq230 95.1 1e-14
>seq140
Length=127049
Score = 141 bits (156), Expect = 8e-29
Identities = 394/598 (66%), Gaps = 11/598 (2%)
Strand=Plus/Minus
Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596
|||||||| ||||||| || |||| | || || ||| | |||||| || |||
Sbjct 7131 AGATTTGTTTTGTTTCCAATCAAATACCATGAAATCTGGCAAGCTTACAAACGTGCTGAA 7072
Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656
|| || |||||||| | |||||| | || || || || ||| | ||| ||| ||
Sbjct 7071 GCTTCATTTTGGACTGCAGAAGAAATCGATCTTTCCAAAGATATCCACGACTGGAATAAT 7012
Query 57657 C---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCC 57713
| || ||| ||| ||| ||| |||| || || || |||||||| || ||
Sbjct 7011 AGAATGAATGAAAATGAAAGATTTTTCATTAGTAGAGTTTTAGCATTTTTCGCTGCTTCA 6952
Query 57714 GATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCA--CAAGAAGTGCAAGTGACGG 57771
||||| ||||| || ||||||||||| | ||| ||||| |||||||| | | |
Sbjct 6951 GATGGGATTGTCAATGAGAATTTGGTGG--AGAATTTCAGTGCTGAAGTGCAGATTCCAG 6894
Query 57772 AGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATT 57831
| || | ||| |||||||| || ||| | || ||||| | ||| |||| ||||
Sbjct 6893 AAGCTAAATGTTTTTACGGGTTCCAAATCATGATGGAAAATATCCATAGTGAAACATATT 6834
Query 57832 CGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAA-CGTAGAC-TGTTCAACGC 57889
|||| | |||||||| || | || | | | | ||||| | | | ||||||| ||
Sbjct 6833 CGCTTTTGATCGATACTTATATCAA--AGATCCAAAAGAAAGTGAATTCTTGTTCAATGC 6776
Query 57890 GATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAG 57949
|| ||||| || || ||| | || || || ||| | || | |||||| ||
Sbjct 6775 TATTGAAACTATTCCACAAATCAAAGAAAAAGCTGAATGGGCTATTAGATGGATTCAAGA 6716
Query 57950 CGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTT 58009
| || || || || || | | || || || || || |||||| | |||||
Sbjct 6715 TGAAGATGCATTATTTGCTGAAAGATTGGTGGCATTTGCTGCTGTTGAAGGTGTTTTCTT 6656
Query 58010 TTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGAC 58069
||| || ||||| ||||| |||||| | |||||| || ||||||| || ||||
Sbjct 6655 TTCCGGTTCATTTGCTGCAATTTTTTGGTTAAAGAAAAAGGGGTTGATGCCAGGTTTGAC 6596
Query 58070 GTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTA 58127
||| || || ||||| | | || || || || || ||||||||||| || |||
Sbjct 6595 TTTTTCAAATGAATTGATTTGTAGAGATGAAGGGCTACACACTGATTTTGCATGTCTA 6538
>seq182
Length=55006
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| || ||| ||||||| ||||| || ||| | || || ||| |
Sbjct 1663 AAGATGCAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTCGAATCC 1722
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | || | || ||| | ||| ||||| ||||| | || || |||
Sbjct 1723 TCTGACACCATTGACAATGTTAAAGCCAAAATCCAAGACAAAGAAGGTATCCCACCTGAC 1782
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|| || | | || || ||||| ||||| |||||||| || ||| || || ||
Sbjct 1783 CAACAAAGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTAC 1842
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||||||||||||||| || ||||| |||| | ||| |||| || |||
Sbjct 1843 AACATTCAAAAAGAATCCACCCTTCACTTGGTTTTGAGATTGAGAGGTGGT 1893
>seq70
Length=20209
Score = 111 bits (122), Expect = 1e-19
Identities = 166/236 (70%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 31185 AATCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTG 31244
||| ||| ||||||||||| || || ||| |||| || ||||| ||||| | || ||||
Sbjct 19812 AATAAAAAATGCAAATTTTTGTTAAAACTTTGACTGGGAAAACCATCACTTTGGAAGTTG 19753
Query 31245 AACCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGC 31304
|| | || |||| |||| | ||||| | || |||||| ||||| | || |
Sbjct 19752 AATCCTCAGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAAGGGATTCCAC 19693
Query 31305 CCGACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCG 31364
| ||||| || | | || || ||||| ||||||||||||||| | || || ||
Sbjct 19692 CTGACCAACAAAGATTGATTTTTGCTGGTAAACAGTTGGAAGACGGCAGAACGTTGTCCG 19633
Query 31365 ATTATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
| || ||||| ||||| || ||||| || || |||| | ||| |||| || |||
Sbjct 19632 ACTACAACATCCAAAAGGAGTCGACCCTCCACTTGGTTTTGAGATTGAGAGGTGGT 19577
>seq230
Length=21327
Score = 95.1 bits (104), Expect = 1e-14
Identities = 153/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260
||| || || || | || || || || ||||| | || || ||| | ||||||| |
Sbjct 13447 TTTTGTCAAAACCTTAACTGGTAAGACTATCACTCTAGAAGTCGAATCCTCCGACACCAT 13506
Query 31261 CGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCT 31320
||| | |||||| | ||| ||||| ||||| | || || ||||| || | |
Sbjct 13507 CGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 13566
Query 31321 AATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAA 31380
|| || ||||| ||||| |||||||| || ||| || || || |||||||||||
Sbjct 13567 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 13626
Query 31381 AGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|||||| |||||||| |||| | ||| |||| || |||
Sbjct 13627 AGAATCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGGT 13666
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445764700515600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |