Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq82 394 1e-104
seq140 309 4e-79
>seq82
Length=13639
Score = 394 bits (436), Expect = 1e-104
Identities = 1458/2255 (65%), Gaps = 81/2255 (4%)
Strand=Plus/Plus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
|| || || |||| ||| || || | || || | | |||||||| || ||||| | |
Sbjct 11184 GTAAACTGGATGGCAGCAGAAGCAGCTTGGGTTCTCAAGTAGTACATCCCTGTTTTCAAA 11243
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 62163
|| | ||| ||||| |||||||| || ||||| || | || | || |
Sbjct 11244 CCTTTAGACCACCCGTAGAAATGCATGGAGGTCAGTTTCCCCATTGTTGGGGCCATG--A 11301
Query 62164 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62223
| |||||||| | ||| ||| |||||| ||||| || ||||| |||||||| | |
Sbjct 11302 TGTGGATATTTAGAGAGTGAGATTGATCAATGAAAGCGGATCTGTCAGCAGCCATGTCGA 11361
Query 62224 TGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 62282
||||||||||||| | | |||||||| ||||| || || || | ||| |||| |||
Sbjct 11362 TGATCGTCTTTTGAGACAATTCCCAAACTGTTTTGTACAAGTCTTTCAAT-TCTTGAGGA 11420
Query 62283 AGGTTTGTA---TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCA 62339
| ||||| | |||||||| || | | || || | || || ||||
Sbjct 11421 ATGTTTGGCAAGTGTTGAATGGACCCGTTGTTGGCAATGATGTTTGATTTCATAGCATCG 11480
Query 62340 TTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTC 62398
||||| ||| | || ||| |||| || | | || || || | |||||||||
Sbjct 11481 TTCCA-AATGCCCAAATCAACCAAATCTCTTAGCAAGTATGGATTGACAATTTGGAATTC 11539
Query 62399 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATT 62458
|||||||| ||| | || ||| || || || | ||||| | | || || |
Sbjct 11540 ACCAGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTA 11599
Query 62459 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 62518
||||| ||||| | |||||||| || ||||| || |||| || || ||||| |
Sbjct 11600 ACCCAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAA 11659
Query 62519 ACC-GTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAA 62577
|| || | | ||||| ||| | | | |||||| | ||| | ||| | || |
Sbjct 11660 TCCAGTTTCCACA-ATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAGTTGGAGCTC 11718
Query 62578 CANNNNNNNNNNNATATTGTAGAATACC--GTTA--CTGGCGTACGATCCTACATATGTA 62633
| | |||| | || ||| || | |||| | || | | | ||
Sbjct 11719 TATCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAA-AGAT--- 11774
Query 62634 TCATATGGTCCTTCCTTCTCAGCTAGTT---TACAACTCGCCTCTAATGCACCGTAATAA 62690
| ||||| ||||| | | | || | || | || | || |||||| | | ||
Sbjct 11775 TGGTATGGACCTTCTTCCACGGCCATTTCGTTTGAA---GATTCCAATGCAGCATGGTAC 11831
Query 62691 ATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTT 62750
| ||||| || || | |||| || | || |||| | |||||||||| |
Sbjct 11832 AATGTTTCGAAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATGGAATTCTC 11891
Query 62751 AAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTA 62810
|| || ||||| | || || || ||||||||||||| | |||||||| |||||| ||
Sbjct 11892 AAAAGCATAAAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATA 11951
Query 62811 TTAGAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 62867
|| ||| || ||| ||| | ||| |||||||| | || || | | | || | |
Sbjct 11952 TTTGAGTTTCTTGCAGTTTCC---ACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAA 12008
Query 62868 TTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---------TCGC 62918
||||| ||| ||||| | ||||| | | ||| | |||||| | | |
Sbjct 12009 TTTCTTGTAATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGA 12068
Query 62919 CCATCTATTACAAACAT----------GTTCAATGCAACAGATGCCAGATTACACACGGC 62968
|||||| | |||||| | ||| |||| ||| |||| |||||| || ||
Sbjct 12069 CCATCTTCTG-AAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGC 12127
Query 62969 ---TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGAT 63025
| | || ||| || | ||||| | || ||| || | |||| | |||||
Sbjct 12128 AGTTTCGTCGTTA---TCTGAATATTCCACAATTTCACAACACAAATTAGATGATTTGAT 12184
Query 63026 AGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGG 63085
|||||||||||||| ||||||| ||||||||||| ||||| || |||| ||| |||||
Sbjct 12185 AGTTCCTAAATTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGG 12244
Query 63086 AGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTAT 63145
||||| |||||| | || | ||| | || || | ||| | | | || |||| ||
Sbjct 12245 TGTACCTGTTTCAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGC-TTTA--AT 12301
Query 63146 AGATTTG-TATCTCCT--TTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCC 63202
|| ||| || ||| | |||| | ||| | | |||||| ||| || || | ||
Sbjct 12302 AGTTTTTCTACCTCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGCACC 12361
Query 63203 CCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATC 63262
|||||| || | ||| |||| ||| | | ||| | ||| ||| | ||
Sbjct 12362 ATAAACATCACTTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATTTTC 12421
Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322
|| ||| || |||||| | ||| |||| ||| | || ||| | |||||||| |||
Sbjct 12422 TTTAACTTTTTGCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGCTCT 12481
Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382
| ||| || || || ||| || || ||| | || | | ||||||| ||||||
Sbjct 12482 AATTTCTTCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCA 12541
Query 63383 CGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCT 63442
||||| || || | || | | | ||||| | ||| || || || ||||| | |||||
Sbjct 12542 TGGTTCTAAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCT 12601
Query 63443 AGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACC 63502
|| || ||||| ||||||| | ||||||||| | || || || | ||||| |||||
Sbjct 12602 TGCAGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAGTACC 12661
Query 63503 GGAGATATAGCCTCCACTGGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCA 63561
| ||||| || | | | ||||||| ||| ||| ||||| || || || ||
Sbjct 12662 TGCAATATAAGAACCGGTTGATCTAATATTATGAATATGA-AGACCAATACCACCAGCAG 12720
Query 63562 TTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGA 63621
||||||| || || || ||| |||||| || ||||| || || || ||| ||| ||
Sbjct 12721 TTTTAGAAATCAAAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCGTCTT 12780
Query 63622 TCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGG 63681
|||| || || ||||| ||||||||| | | | ||||| ||||| ||||| |
Sbjct 12781 TCATAGCAACAAGGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAATAAAG 12840
Query 63682 TAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGT 63741
| ||||| || || || || || | ||| | | ||| || || || | || |
Sbjct 12841 TTGGAGATGCATGTGTGAAATATCTCAAAGACATCAAATTATAAGTTTCCAAGACTTTTT 12900
Query 63742 CTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAA 63801
| ||||| | |||||| || || || || | ||| | || || ||||||||||||
Sbjct 12901 CAATATCTGAACCATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCTTTCAG 12960
Query 63802 CAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGT 63861
|||||| || ||| | || || || ||| ||||||| ||||| ||||||||||| |
Sbjct 12961 CAATTTGTCCATTGATTCTTAATAAATACGATCTTTCCAATGTTTTGAAACCAAAATAAT 13020
Query 63862 TGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAA 63921
| ||| || |||| || |||| |||| | ||| | ||| |||| ||| | |
Sbjct 13021 TATATTGGAAATCTCTATCATAAACAATAGCACTATTTAAAACATCTTTATTTTTTTCTA 13080
Query 63922 CTAT---ATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAA 63978
| || || | | | ||| ||| || ||||| | | |||||||| |||||
Sbjct 13081 CAATTTGATAAACGTCATCACT---AATCATTGGAGATTTTAATCCATTTTTTTCATTAA 13137
Query 63979 CATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGAT 64038
|||| ||||||| || |||| | |||| ||||||| |||| || |||| ||
Sbjct 13138 CATAAAAATATAAATCTGAAATGACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAAT 13197
Query 64039 TTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG--TTGT-GTAGTACAAG 64095
| || || || ||||| || || | | |||||||| ||||| | || || || ||
Sbjct 13198 TAGAAATAGCAATTCTTGCAGCCAATGTAGCATAATCAGGATGAATAGTGGTCATATAA- 13256
Query 64096 TGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTC 64155
|| | |||| || |||| | | |||||||| | || || || || | ||| | |
Sbjct 13257 --GCACATGTTTCAGCAGCCAAATTATCCAATTCAATAGTAGTAACACCTTCATAAACAC 13314
Query 64156 CTTGAATAA-CCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAG 64214
| |||| ||| | | || || |||||| ||||| | | | ||| |||||
Sbjct 13315 CAGATATAATTCTTTGT-GTAATAGAAACAGGATCAATATGGTTTGGATCTAAACCATAA 13373
Query 64215 CACAATTTTCTAATACGAGACGTGATTTTATCAAA 64249
|| ||| | ||| | ||| ||||||||||||||
Sbjct 13374 CATAATCTAGCAATTCTAGAAGTGATTTTATCAAA 13408
>seq140
Length=127049
Score = 309 bits (342), Expect = 4e-79
Identities = 609/896 (68%), Gaps = 10/896 (1%)
Strand=Plus/Plus
Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337
|||||| || |||||| || ||| || | |||||| || ||||| ||||| ||| |
Sbjct 6238 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 6297
Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397
||||| ||||||||||| |||||||| ||||| | |||||| ||| ||||| | ||
Sbjct 6298 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACC 6357
Query 33398 CAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATT 33457
||| || | |||||||| || || ||||| | |||| ||||||| | || |||
Sbjct 6358 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 6417
Query 33458 CATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGC 33517
||| |||| | ||| || | || | || | || || |||||| || || ||
Sbjct 6418 CATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAGC 6477
Query 33518 ATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACAT 33577
| || ||||| | | || ||| | | ||| || | ||||||| ||| |
Sbjct 6478 TTCAGTAATAATTCTTTCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATAA 6537
Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637
| |||||| ||||| ||| || || || ||||||| ||| ||||| || ||||| ||
Sbjct 6538 TAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAGT 6597
Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697
| || ||||| | || || || | |||||| || | ||| ||||| ||||||||
Sbjct 6598 CAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAAA 6657
Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAA-CCGGCGCTGTC 33754
||| | ||||| || |||||||| || | | ||| || | |||| | | ||
Sbjct 6658 GAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCATC 6717
Query 33755 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33814
|| ||||| | |||||| || || || | ||| | || || ||||| || ||
Sbjct 6718 TTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAGC 6777
Query 33815 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33874
||| || | | | |||| || |||||| | |||||||||||||||||| |||
Sbjct 6778 ATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAATA 6837
Query 33875 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33934
|||| ||| || ||||| || || || || ||||| |||||| |||| || |
Sbjct 6838 TGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCTGG 6897
Query 33935 AATCTGCACTTCTGTAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTG 33992
|||||||||||| | || ||| || || | ||||| ||||| || || |||||
Sbjct 6898 AATCTGCACTTCAGCACTGAAATTC--TCCACCAAATTCTCATTGACAATCCCATCTGAA 6955
Query 33993 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTA 34049
|| || ||||| || || || | || ||| || |||| | | | | | |||
Sbjct 6956 GCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTATTA 7015
Query 34050 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 34109
||||| || | ||||||||| || | ||| | |||||| | ||||||||||| || ||
Sbjct 7016 TTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTCA 7075
Query 34110 GCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165
|| ||| || | |||||| ||||| |||| |||||| || | |||||||||
Sbjct 7076 GCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCT 7131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629815198820400
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