Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq82 407 2e-108 seq140 320 2e-82 >seq82 Length=13639 Score = 407 bits (450), Expect = 2e-108 Identities = 1462/2255 (65%), Gaps = 81/2255 (4%) Strand=Plus/Plus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 || || || |||| ||| || || | || || | | |||||||| || ||||| | | Sbjct 11184 GTAAACTGGATGGCAGCAGAAGCAGCTTGGGTTCTCAAGTAGTACATCCCTGTTTTCAAA 11243 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 64956 || | ||| ||||| |||||||| || ||||| || | || | || | Sbjct 11244 CCTTTAGACCACCCGTAGAAATGCATGGAGGTCAGTTTCCCCATTGTTGGGGCCATG--A 11301 Query 64957 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 65016 | |||||||| | ||| ||| |||||| ||||| || ||||| |||||||| | | Sbjct 11302 TGTGGATATTTAGAGAGTGAGATTGATCAATGAAAGCGGATCTGTCAGCAGCCATGTCGA 11361 Query 65017 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 65075 ||||||||||||| | | |||||||| ||||| || || || | ||| |||| ||| Sbjct 11362 TGATCGTCTTTTGAGACAATTCCCAAACTGTTTTGTACAAGTCTTTCAAT-TCTTGAGGA 11420 Query 65076 AGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCA 65132 | ||||| | |||||||| || | || || || | || || |||| Sbjct 11421 ATGTTTGGCAAGTGTTGAATGGACCCGTTGTTGGCAATGATGTTTGATTTCATAGCATCG 11480 Query 65133 TTCCATAATTTTCTC-TCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 65191 ||||| ||| | || ||| |||| || | | ||||| || | ||| ||||| Sbjct 11481 TTCCA-AATGCCCAAATCAACCAAATCTCTTAGCAAGTATGGATTGACAATTTGGAATTC 11539 Query 65192 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 65251 |||||||| ||| | || ||| || || || | ||||| | | | || || | Sbjct 11540 ACCAGACAACGTTCTTCTAGAGTACATGTTTGAAGTGAATGGTTCGAAACATTCGTTGTA 11599 Query 65252 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 65311 ||||| ||||| | |||||||| || ||||| || |||| || || ||||| | Sbjct 11600 ACCCAAGATTTGCGATGTTGATGCTGTTGGCATTGGAGCCAATAACAATGAGTTTCTCAA 11659 Query 65312 ACC-GTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 65370 || || | | ||||| ||| | | || |||||| | ||| | ||| | || | Sbjct 11660 TCCAGTTTCCACA-ATTTTTTCTCTCAAAGATTCCCATTCCCACAAATCAGTTGGAGCTC 11718 Query 65371 CNNNNNNNNNNNNNNNTTGTAGAATACC--GTTA--CTGGCGTACGATCCTACATATGTA 65426 ||| | || ||| || | |||| | || | | | || Sbjct 11719 TATCCCACATGTCAAATTGCAAAACACCTTGTGAAGCTGGTGAACCTTGGAA-AGAT--- 11774 Query 65427 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 65486 | |||||| ||||| | | | || | ||| | || |||||| | | || | Sbjct 11775 TGGTATGGACCTTCTTCCACGGCCATTTCGTTTGAAGATTCCAATGCAGCATGGTACAAT 11834 Query 65487 GTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG 65546 |||||||| || | |||| || | || |||| | |||||||||| | || Sbjct 11835 GTTTCGAAAATTTGAATATTCAGTTGTTTGGCTTGTTCGGAATCAAATGGAATTCTCAAA 11894 Query 65547 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 65606 || ||||| | || || || ||||||||||||| | |||||||| |||||| |||| Sbjct 11895 AGCATAAAAGTATCAGCCAAACCTTGAACACCAAGGGCAATAGGTCTGTGTCTCATATTT 11954 Query 65607 GAGATTT---CAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTT 65663 ||| || ||| ||| | ||| |||||||| | || || | | | || | |||| Sbjct 11955 GAGTTTCTTGCAGTTTCC---ACAGGGTAATAATTTCTGTCAATGACTCTGTTCAAATTT 12011 Query 65664 CTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---------TCGCTCA 65714 || ||| ||||| | ||||| | | ||| | |||||| | | | || Sbjct 12012 CTTGTAATGACTTTTGCAACATCGTGTAATTTTTGGAAATCATAAGTTTGTTGTTGACCA 12071 Query 65715 TCTATTACAAACAT----------GTTCAATGCAACAGATGCCAGATTACAAACGGC--- 65761 ||| | |||||| | ||| |||| ||| |||| ||||||||| || Sbjct 12072 TCTTCTG-AAACATTGATGAAAGCGGGCAAAGCAATAGAAGCCAAATTACAAACAGCAGT 12130 Query 65762 TACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGT 65821 | | || ||| || | ||||| | || ||| || | |||| | ||||| || Sbjct 12131 TTCGTCGTTA---TCTGAATATTCCACAATTTCACAACACAAATTAGATGATTTGATAGT 12187 Query 65822 TCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGT 65881 ||||||||||| ||||||| ||||||||||| ||||| || |||| ||| ||||| || Sbjct 12188 TCCTAAATTTTTTTGATTAGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGT 12247 Query 65882 ACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGA 65941 ||| |||||| | || | ||| | || || | ||| | | | || |||| |||| Sbjct 12248 ACCTGTTTCAGTTTGTGCTTCCAAGATAGCATACCATAATTTTTGTGC-TTTA--ATAGT 12304 Query 65942 TTTG-TATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCA 65998 ||| || ||||| |||| | ||| | |||||| ||| || || | || | Sbjct 12305 TTTTCTACCTCTTCCTTCTGAAACATATCTATTGTACAATTTTTCAAAATCTGCACCATA 12364 Query 65999 AACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTT 66058 ||||| || || ||| |||| ||| | | ||| | ||| ||| | || || Sbjct 12365 AACATCACTTAAACCTGGAGCTTCACTTGGAGAAAACAATGTCCAATCTGAATTTTCTTT 12424 Query 66059 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATG 66118 ||| || |||||| | ||| |||| ||| | || ||| |||||||| | |||| Sbjct 12425 AACTTTTTGCATAAATAAATCTGGAACCCATAATGCAGGAAACAAATCTCTTGCTCTAAT 12484 Query 66119 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGG 66178 ||| || || || ||| || || ||| | || | | ||||||| |||||| || Sbjct 12485 TTCTTCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCATGG 12544 Query 66179 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 66238 ||| || || | || | | | ||||| | ||| || || || ||||| | ||||| || Sbjct 12545 TTCTAAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGC 12604 Query 66239 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGA 66298 || ||||| ||||||| | ||||||||| | ||||| || || ||||| || || | Sbjct 12605 AGTATTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTCCCATTAGTACCTGC 12664 Query 66299 GATATAGCTTCCACTTGCACGAATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTT 66357 ||||| || ||| | ||||||| ||| ||| ||||| || || || || ||| Sbjct 12665 AATATAAGAACCGGTTGATCTAATATTATGAATATGA-AGACCAATACCACCAGCAGTTT 12723 Query 66358 TAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCA 66417 |||| || || || ||| |||||| |||||||| || || || || ||| || ||| Sbjct 12724 TAGAAATCAAAGCACATTCTTTTAAAGTATCATAAATACCATCAATGGAATCGTCTTTCA 12783 Query 66418 TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAG 66477 | || || ||||| ||||||||| | | ||||| ||||| ||||| || | Sbjct 12784 TAGCAACAAGGAAACATGAAGACATTTGAGGTCTTGGTGTTCCAGCATTGAATAAAGTTG 12843 Query 66478 GAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTA 66537 |||| || || || || || | ||| | | ||| || || || | || || | Sbjct 12844 GAGATGCATGTGTGAAATATCTCAAAGACATCAAATTATAAGTTTCCAAGACTTTTTCAA 12903 Query 66538 TATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 66597 |||| | |||||| || || || || | ||| | || || |||||||||||| | | Sbjct 12904 TATCTGAACCATGAATCCCGACAGCAACTCTCATGATCAAATGTTGAGGTCTTTCAGCAA 12963 Query 66598 TCTTGT-TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 66656 | |||| || ||| | || || || ||| ||||||| ||||| ||||||||||| || Sbjct 12964 T-TTGTCCATTGATTCTTAATAAATACGATCTTTCCAATGTTTTGAAACCAAAATAATTA 13022 Query 66657 TATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACT 66716 ||| || |||| || |||| |||| | || | ||| |||| ||| | || Sbjct 13023 TATTGGAAATCTCTATCATAAACAATAGCACTATTTAAAACATCTTTATTTTTTT---CT 13079 Query 66717 ACATCCATGGTAATACTTGA-----AATAATCGGAGAATGTTTCCCATTTTTAGGATTGA 66771 ||| || ||| || | | ||| || ||||| | | |||||||| ||| | Sbjct 13080 ACA-ATTTGATAA-ACGTCATCACTAATCATTGGAGATTTTAATCCATTTTTTTCATTAA 13137 Query 66772 CATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGAT 66831 |||| ||||||| || |||| | |||| ||||||| |||| ||| |||| || Sbjct 13138 CATAAAAATATAAATCTGAAATGACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAAT 13197 Query 66832 TTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG--TTGT-GTAGTACAAG 66888 | || | || ||||| || || | | |||||||| ||||| | || || || || Sbjct 13198 TAGAAATAGCAATTCTTGCAGCCAATGTAGCATAATCAGGATGAATAGTGGTCATATAA- 13256 Query 66889 TGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTC 66948 || | |||| || |||| | | |||||||| | || || || || | ||| | | Sbjct 13257 --GCACATGTTTCAGCAGCCAAATTATCCAATTCAATAGTAGTAACACCTTCATAAACAC 13314 Query 66949 CTTGGATAA-CCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAA 67007 | |||| ||| | | || || |||||| ||||| | | | ||| |||||| Sbjct 13315 CAGATATAATTCTTTGT-GTAATAGAAACAGGATCAATATGGTTTGGATCTAAACCATAA 13373 Query 67008 CATAATTTTCTAATACGAGATGTGATTTTATCAAA 67042 |||||| | ||| | ||| |||||||||||||| Sbjct 13374 CATAATCTAGCAATTCTAGAAGTGATTTTATCAAA 13408 >seq140 Length=127049 Score = 320 bits (354), Expect = 2e-82 Identities = 620/908 (68%), Gaps = 13/908 (1%) Strand=Plus/Plus Query 35854 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 35913 |||||| || |||||| || ||| || | |||||| || ||||| ||||||||| | Sbjct 6238 CATAACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTGGTTTTACCTGC 6297 Query 35914 TAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCC 35973 |||||| ||||||||||| ||||| |||||||| |||||||||| ||||| | || Sbjct 6298 TAATGAAATATTTTCCATAAAATCAAATGGATTTGAAACATTATAATATTTTTCATTACC 6357 Query 35974 CAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 36033 ||| || | |||||||| || |||||||| | |||| ||||||| | || ||| Sbjct 6358 TAATGCAACCAATAATCTATCAGCAACAAATTCAACATATTGATTCATCAATGCAGCATT 6417 Query 36034 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 36093 ||| |||| | ||| || | || | || | || || ||||||||| || || Sbjct 6418 CATACCTAATAAAGAAACAGGCAATGCATCTTCAAAATATCTTTTTTCAATAGAAACAGC 6477 Query 36094 GTCTGTTATAATAGATATTACTGTTTCTTCACTC-GGTGGATACAATAAATGTTTAAACA 36152 || || ||||| | | | | || || || ||| || ||||||| ||| | Sbjct 6478 TTCAGTAATAATTCTT-TCAGCGATTTTTGGATCTGGTTTATTTTCCAAATGTTGAAATA 6536 Query 36153 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 36212 | |||||| ||||| |||||| || || ||||||| ||| ||||| || ||||| | Sbjct 6537 ATAGACATGCAAAATCAGTGTGTAGCCCTTCATCTCTACAAATCAATTCATTTGAAAAAG 6596 Query 36213 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 36272 | | || ||||| | || || || | |||||| || | |||||||| || |||| Sbjct 6597 TCAAACCTGGCATCAACCCCTTTTTCTTTAACCAAAAAATTGCAGCAAATGAACCGGAAA 6656 Query 36273 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCAT 36332 |||||| ||||| || || ||||| || | | ||| || || | ||| |||| Sbjct 6657 AGAAAACACCTTCAACAGCAGCAAATGCCACCAATCTTTCAGCAAATAATGCATCTTCAT 6716 Query 36333 GT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 36389 | ||||| | |||||| || || || | ||| | || || || || |||| Sbjct 6717 CTTGAATCCATCTAATAGCCCATTCAGCTTTTTCTTTGATTTGTGGAATAGTTTCAATAG 6776 Query 36390 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 36449 |||| || | | | |||| || |||||| | ||| ||||| |||||||| || Sbjct 6777 CATTGAACAAGAATTCACTTTCTTTTGGATCTTTGATATAAGTATCGATCAAAAGCGAAT 6836 Query 36450 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 36509 | |||| ||| || ||||| || ||||| || ||||| |||||| |||| || | Sbjct 6837 ATGTTTCACTATGGATATTTTCCATCATGATTTGGAACCCGTAAAAACATTTAGCTTCTG 6896 Query 36510 TAATCTGTACTTCTGTAC--AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 36567 |||||| ||||| | || ||| || || | ||||| ||||| || || || || Sbjct 6897 GAATCTGCACTTCAGCACTGAAATTC--TCCACCAAATTCTCATTGACAATCCCATCTGA 6954 Query 36568 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGT---TT 36624 || || ||||| || || || | || ||| || |||| ||| | | | || Sbjct 6955 AGCAGCGAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTATT 7014 Query 36625 ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTC 36684 |||||| || | ||||||||| || | ||| | |||||| | ||||||||||| || || Sbjct 7015 ATTCCAGTCGTGGATATCTTTGGAAAGATCGATTTCTTCTGCAGTCCAAAATGAAGCTTC 7074 Query 36685 TGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATC-TAT 36743 || ||| || | |||||| ||||| |||| |||||||| | |||||||| | | Sbjct 7075 AGCACGTTTGTAAGCTTGCCAGATTTCATGGTATTTGATTGGAAACAAAACAAATCTTCT 7134 Query 36744 TTTGATTT 36751 |||| ||| Sbjct 7135 TTTGTTTT 7142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658170290716200